RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PHACTR4Q8IZ21 702 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 CHPFQ8IZ52 775 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 ADGRG2Q8IZP9 1017 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 SLC35F6Q8N357 371 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 LRRC57Q8N9N7 239 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 ANKRD52Q8NB46 1076 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 STKLD1Q8NE28 680 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 FBXO27Q8NI29 283 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 SLC35G2Q8TBE7 412 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 MYCBPAPQ8TBZ2 947 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 SPPL2BQ8TCT7 592 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 GIPC2Q8TF65 315 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 CLEC4CQ8WTT0 213 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 SSC4DQ8WTU2 575 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 SNX19Q92543 992 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 SKA1Q96BD8 255 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 ZNF653Q96CK0 615 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 GRAMD1AQ96CP6 724 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 TNIP3Q96KP6 325 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 KCNK16Q96T55 309 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 G6PC3Q9BUM1 346 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 DUSP16Q9BY84 665 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 PDCL3Q9H2J4 239 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 GOLPH3Q9H4A6 298 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 TRPC7Q9HCX4 862 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 ZDHHC4Q9NPG8 344 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 ITM2CQ9NQX7 267 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 ADAM22Q9P0K1 906 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 DEC1Q9P2X7 70 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 MYO1AQ9UBC5 1043 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 DKK3Q9UBP4 350 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 CNOT8Q9UFF9 292 aaKnown RBP4.91□□□□□ -1.62
PTPN4-206ENST00000441089 ARHGAP26Q9UNA1 814 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 UNC13CQ8NB66 2214 aa4.91□□□□□ -1.62
PTPN4-206ENST00000441089 PLXNA2O75051 1894 aa4.9□□□□□ -1.62
PTPN4-206ENST00000441089 CBX4O00257 560 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 KCNK3O14649 394 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 RGS13O14921 159 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 XPO1O14980 1071 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 CCP110O43303 1012 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 KRT86O43790 486 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 BUB1BO60566 1050 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 PALMO75781 387 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 MTA2O94776 668 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ATE1O95260 518 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 IPO7O95373 1038 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 CALB1P05937 261 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 FAM200BP0CF97 657 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 SETSIPP0DME0 302 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 TNNT1P13805 278 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 HMGA1P17096 107 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 HDCP19113 662 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 BDNFP23560 247 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ACP1P24666 158 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 CYP2F1P24903 491 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 DCTP40126 519 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 WASP42768 502 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 GABRB2P47870 512 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 SLC6A11P48066 632 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ARRB1P49407 418 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 PGFP49763 221 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 DUSP3P51452 185 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 BCAT1P54687 386 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 HADHBP55084 474 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 MAP3K7CLP57077 242 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 GNG11P61952 73 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 RPL7AP62424 266 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 IL9RQ01113 521 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 EFEMP1Q12805 493 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 MAMLD1Q13495 774 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 NR0B2Q15466 257 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 TAF5Q15542 800 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 SKIDA1Q1XH10 827 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 RAB6CQ53S08 254 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ZNF569Q5MCW4 686 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 FHL5Q5TD97 284 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 SDHAF4Q5VUM1 108 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 OLFML1Q6UWY5 402 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 SYT10Q6XYQ8 523 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 MAMDC2Q7Z304 686 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 KANSL1Q7Z3B3 1105 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 TMEM110Q86TL2 294 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 PIGZQ86VD9 579 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 GATAD2AQ86YP4 633 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 LILRA2Q8N149 483 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 THEM5Q8N1Q8 247 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ARL14Q8N4G2 192 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 EID2Q8N6I1 236 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 JOSD2Q8TAC2 188 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 CTNNBL1Q8WYA6 563 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 NDRG1Q92597 394 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 TRMT2BQ96GJ1 504 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ELF4Q99607 663 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 GABRG3Q99928 467 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 MED10Q9BTT4 135 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 NUP85Q9BW27 656 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ACE2Q9BYF1 805 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 TSGA10Q9BZW7 698 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 RAB6CQ9H0N0 254 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 CSNK1G1Q9HCP0 422 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms