RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 LPCAT1Q8NF37 534 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 OR4L1Q8NH43 312 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 HEXDCQ8WVB3 486 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 BADQ92934 168 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ACDQ96AP0 544 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 UBXN10Q96LJ8 280 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 EBF4Q9BQW3 602 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 C2orf49Q9BVC5 232 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CDH19Q9H159 772 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 SUDS3Q9H7L9 328 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 TLE6Q9H808 572 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 POPDC3Q9HBV1 291 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 INTS10Q9NVR2 710 aaKnown RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PNPOQ9NVS9 261 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 HACD3Q9P035 362 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 CXXC1Q9P0U4 656 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-202ENST00000439724 ARHGAP26Q9UNA1 814 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 VWA7Q9Y334 891 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 PCDHGC4Q9Y5F7 938 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 BRCA2P51587 3418 aa11.81□□□□□ -0.52
SMAD3-202ENST00000439724 C2orf81A6NN90 581 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 CAPN14A8MX76 684 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 ANKRD66B4E2M5 251 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 LEFTY2O00292 366 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 NRG2O14511 850 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 BUD23O43709 281 aaKnown RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 FZD6O60353 706 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 DLX3O60479 287 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 FGF19O95750 216 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PDHA1P08559 390 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 RBP1P09455 135 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 LPOP22079 712 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 ATP5F1P24539 256 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 DDX6P26196 483 aaKnown RBP eCLIP11.8□□□□□ -0.521e-5■■■□□ 17.8
SMAD3-202ENST00000439724 CTNNB1P35222 781 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 GRIA4P48058 902 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 SUOXP51687 545 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 STC1P52823 247 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PLK1P53350 603 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 DNAJB13P59910 316 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PFKPQ01813 784 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 CSHL1Q14406 222 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 SEMA3AQ14563 771 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PTPRCAPQ14761 206 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 KLC3Q6P597 504 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 SDCCAG8Q86SQ7 713 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 METTL3Q86U44 580 aaKnown RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PARP9Q8IXQ6 854 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 MRPL43Q8N983 215 aaKnown RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 MDGA1Q8NFP4 955 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 FIBINQ8TAL6 211 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PHOSPHO2Q8TCD6 241 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 DDI1Q8WTU0 396 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PDCD6IPQ8WUM4 868 aaKnown RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 STON2Q8WXE9 905 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 USP13Q92995 863 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-202ENST00000439724 RILPQ96NA2 401 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 TCF12Q99081 682 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 CORO1BQ9BR76 489 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 SLC46A2Q9BY10 475 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 GPAMQ9HCL2 828 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 RAP2CQ9Y3L5 183 aa11.8□□□□□ -0.52
SMAD3-202ENST00000439724 CCL16O15467 120 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 NPHS1O60500 1241 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 GJA1P17302 382 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 SERPINB5P36952 375 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 CSNK1DP48730 415 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 IDH3AP50213 366 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 CLCN4P51793 760 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 CDKN2DP55273 166 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 UBE3AQ05086 875 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 LMAN2Q12907 356 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 PRKAA1Q13131 559 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 ACAP2Q15057 778 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 ZNF549Q6P9A3 640 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 APCDD1Q8J025 514 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 TTC30BQ8N4P2 665 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 ZNF781Q8N8C0 355 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 TXNDC5Q8NBS9 432 aaKnown RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 OR4K2Q8NGD2 314 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 SHKBP1Q8TBC3 707 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 SLC22A17Q8WUG5 538 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 HERVK_113Q902F9 699 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 UTP4Q969X6 686 aaKnown RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 CCDC126Q96EE4 140 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 AARSD1Q9BTE6 412 aaKnown RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 CCDC106Q9BWC9 280 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 ILKAPQ9H0C8 392 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 KIAA1522Q9P206 1035 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 APOBEC2Q9Y235 224 aaKnown RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 FCF1Q9Y324 198 aaKnown RBP11.79□□□□□ -0.52
SMAD3-202ENST00000439724 RWDD3Q9Y3V2 267 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 GBF1Q92538 1859 aa11.79□□□□□ -0.52
SMAD3-202ENST00000439724 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-202ENST00000439724 LCHNA4D1U4 455 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 SOBPA7XYQ1 873 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms