RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 MMP12P39900 470 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 CLCN5P51795 746 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 GPX6P59796 221 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 FAM193AP78312 1265 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 SLMAPQ14BN4 828 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 TAF1AQ15573 450 aaPredicted RBP7.5□□□□□ -1.21
UBR3-205ENST00000439681 KYNUQ16719 465 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 TMEM52BQ4KMG9 183 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 TSTD2Q5T7W7 516 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 ARMC3Q5W041 872 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 EMBQ6PCB8 327 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 CES3Q6UWW8 571 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 MICALCLQ6ZW33 695 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 USP45Q70EL2 814 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 DPPA4Q7L190 304 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 LYSMD3Q7Z3D4 306 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 NDUFAF2Q8N183 169 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 PAF1Q8N7H5 531 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 PYROXD1Q8WU10 500 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 HNRNPLLQ8WVV9 542 aaKnown RBP7.5□□□□□ -1.21
UBR3-205ENST00000439681 C9orf72Q96LT7 481 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 SRPK1Q96SB4 655 aaKnown RBP7.5□□□□□ -1.21
UBR3-205ENST00000439681 EPB41L4BQ9H329 900 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 TRABDQ9H4I3 376 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 MRM3Q9HC36 420 aaKnown RBP7.5□□□□□ -1.21
UBR3-205ENST00000439681 LRRC4CQ9HCJ2 640 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 CD93Q9NPY3 652 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 DYRK4Q9NR20 520 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 TREX1Q9NSU2 369 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 NINJ2Q9NZG7 142 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.5□□□□□ -1.21
UBR3-205ENST00000439681 HACD3Q9P035 362 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 SCML1Q9UN30 329 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 CHMP2BQ9UQN3 213 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 ZNF711Q9Y462 761 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 MAD1L1Q9Y6D9 718 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 SHROOM3Q8TF72 1996 aa7.5□□□□□ -1.21
UBR3-205ENST00000439681 MIA3Q5JRA6 1907 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 ZCWPW2A0A1B0GU75 182 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 FAM237BA0A1B0GVD1 139 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 HEATR9A2RTY3 570 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 K7ESF4 209 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 AP1G1O43747 822 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 RNASEH2AO75792 299 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 PAPSS2O95340 614 aaPredicted RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 CRTAMO95727 393 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 GM2AP17900 193 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 XPAP23025 273 aaPredicted RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 MAGEA9P43362 315 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CXCL12P48061 93 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 TPMTP51580 245 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 ZNF140P52738 457 aaPredicted RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 PMS2P54278 862 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 SEPT6Q14141 434 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CNGA3Q16281 694 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 ANKRD20A4Q4UJ75 823 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 BEND6Q5SZJ8 279 aaPredicted RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 STEAP4Q687X5 459 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 LRRC66Q68CR7 880 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 ANO7Q6IWH7 933 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 ESRP1Q6NXG1 681 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 ERAP2Q6P179 960 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CASC4Q6P4E1 433 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 KIAA1324Q6UXG2 1013 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 UNC5AQ6ZN44 842 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 RFLNAQ6ZTI6 216 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CEP128Q6ZU80 1094 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 USP30Q70CQ3 517 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 GLT6D1Q7Z4J2 308 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 RASSF3Q86WH2 238 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 PPHLN1Q8NEY8 458 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 TSTD1Q8NFU3 115 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 OR13J1Q8NGT2 312 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 PTCD2Q8WV60 388 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 RAB7BQ96AH8 199 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 MFSD3Q96ES6 412 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 OMDQ99983 421 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 IER2Q9BTL4 223 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CDC42EP4Q9H3Q1 356 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 ZFYVE1Q9HBF4 777 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 IL17CQ9P0M4 197 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 USP36Q9P275 1121 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 ZC3H7BQ9UGR2 993 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 RIMKLBQ9ULI2 386 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 A0A0C4DFX4 3053 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 C1orf232A0A0U1RR37 186 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CCDC78A2IDD5 438 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 C2orf81A6NN90 581 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 C10orf142B7Z368 130 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CCL22O00626 93 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 SLC7A4O43246 635 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 APBB3O95704 486 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 TTC4O95801 387 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 IGLV3-19P01714 112 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 C1SP09871 688 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 CYP2A6P11509 494 aaPredicted RBP7.49□□□□□ -1.21
UBR3-205ENST00000439681 PGAM1P18669 254 aa7.49□□□□□ -1.21
UBR3-205ENST00000439681 LPOP22079 712 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms