RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 DENND6AQ8IWF6 608 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 MB21D2Q8IYB1 491 aaPredicted RBP3.62□□□□□ -1.83
VPS41-207ENST00000439468 ZBTB2Q8N680 514 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 TEX45Q8NA69 505 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 ARRDC2Q8TBH0 407 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 SLC35F5Q8WV83 523 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 OIT3Q8WWZ8 545 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 SNAPC3Q92966 411 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 ARHGEF2Q92974 986 aaKnown RBP3.62□□□□□ -1.83
VPS41-207ENST00000439468 RSRC1Q96IZ7 334 aaKnown RBP3.62□□□□□ -1.83
VPS41-207ENST00000439468 ZNF333Q96JL9 665 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 CMTM3Q96MX0 182 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 GFM1Q96RP9 751 aaKnown RBP3.62□□□□□ -1.83
VPS41-207ENST00000439468 TREX2Q9BQ50 279 aaPredicted RBP3.62□□□□□ -1.83
VPS41-207ENST00000439468 STRA6Q9BX79 667 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 C1QTNF5Q9BXJ0 243 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 BPIFA1Q9NP55 256 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 ANKRD10Q9NXR5 420 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 EHD2Q9NZN4 543 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 ABI3Q9P2A4 366 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 VPS28Q9UK41 221 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 PCDHGB4Q9UN71 923 aa3.62□□□□□ -1.83
VPS41-207ENST00000439468 hCG_1807616A0A1W2PRN6 198 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 AGAP14A8MT82 685 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 GTPBP1O00178 669 aaKnown RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 TAF4O00268 1085 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 VILLO15195 856 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 KIF1CO43896 1103 aaKnown RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 CCNDBP1O95273 360 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 OR2C1O95371 312 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 NGFRP08138 427 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 CLTBP09497 229 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 IRF1P10914 325 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 CDAP32320 146 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 ACSL1P33121 698 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 UBA7P41226 1012 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 ENTPD1P49961 510 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 NLRP5P59047 1200 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 PSMC6P62333 389 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 MC1RQ01726 317 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 CREB5Q02930 508 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 PRKG2Q13237 762 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 IRF3Q14653 427 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 DRAP1Q14919 205 aaPredicted RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 DCAF12L2Q5VW00 463 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 KIAA0930Q6ICG6 404 aaPredicted RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 ANKRD54Q6NXT1 300 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 ARHGAP12Q8IWW6 846 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 NME8Q8N427 588 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 MIGA1Q8NAN2 632 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 OR14L1PQ8NHC6 308 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 B4GALNT2Q8NHY0 566 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 HUS1BQ8NHY5 278 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 GABPB2Q8TAK5 448 aaPredicted RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 SCFD2Q8WU76 684 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 ZNF479Q96JC4 524 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 PPP1R13BQ96KQ4 1090 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 TIGD1Q96MW7 591 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 MAP7D2Q96T17 732 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 SRSF8Q9BRL6 282 aaKnown RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 NTPCRQ9BSD7 190 aaKnown RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 CLK4Q9HAZ1 481 aaKnown RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 ASAH2Q9NR71 780 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 SMYD2Q9NRG4 433 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 CYSLTR2Q9NS75 346 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 CISD1Q9NZ45 108 aaKnown RBP3.61□□□□□ -1.83
VPS41-207ENST00000439468 PROCRQ9UNN8 238 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 NFE2L3Q9Y4A8 694 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 LRP12Q9Y561 859 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 RAI2Q9Y5P3 530 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 CEPT1Q9Y6K0 416 aa3.61□□□□□ -1.83
VPS41-207ENST00000439468 A0A1B0GVT2 93 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 C1orf226A1L170 272 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 MYO1GB0I1T2 1018 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 KDM4EB2RXH2 506 aaPredicted RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 KLKB1P03952 638 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 CYP1A2P05177 515 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 CENPBP07199 599 aaPredicted RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 MMP3P08254 477 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 CYC1P08574 325 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 MYZAPP0CAP1 466 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 G6PDP11413 515 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 PCNAP12004 261 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 PORP16435 677 aaPredicted RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 ALOX12P18054 663 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 HOXA11P31270 313 aaPredicted RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 ARL1P40616 181 aaPredicted RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 EIF2S3P41091 472 aaKnown RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 CSTF3Q12996 717 aaKnown RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 NAE1Q13564 534 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 CTTNQ14247 550 aaKnown RBP3.6□□□□□ -1.83
VPS41-207ENST00000439468 GPR18Q14330 331 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 HNF4GQ14541 408 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 TCTN1Q2MV58 587 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 MMEL1Q495T6 779 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 TRILQ7L0X0 811 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 CHST9Q7L1S5 443 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 SZRD1Q7Z422 152 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 NEXN-AS1Q8NBZ9 246 aa3.6□□□□□ -1.83
VPS41-207ENST00000439468 C7orf57Q8NEG2 295 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms