RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 FAM193BQ96PV7 902 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 CLK4Q9HAZ1 481 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 ARL5CA6NH57 179 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 CFAP99D6REC4 459 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PIRO00625 290 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PPP6CO00743 305 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 GNGT2O14610 69 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 HTRA2O43464 458 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 SRP72O76094 671 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ITGB1P05556 798 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 CYP4B1P13584 511 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 TPSB2P20231 275 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 GPR15P49685 360 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 TPTEP56180 551 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 DAOAP59103 153 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 STX1BP61266 288 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 YBX1P67809 324 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 CTBSQ01459 385 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 RELAQ04206 551 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 TPSAB1Q15661 275 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 CRYBG2Q8N1P7 616 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 OR52K2Q8NGK3 314 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ARNTL2Q8WYA1 636 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 NCSTNQ92542 709 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 FCRL2Q96LA5 508 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 TMEM74Q96NL1 305 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 A8MV72 311 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 H0Y858 1186 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 KLF11O14901 512 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 SNAP29O95721 258 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 BCL10O95999 233 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ITGB6P18564 788 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 HMOX2P30519 316 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 CPT1AP50416 773 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 APLP1P51693 650 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PKDCCQ504Y2 493 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 EPGNQ6UW88 154 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PAQR9Q6ZVX9 377 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 MILR1Q7Z6M3 343 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 STK32CQ86UX6 486 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ABI1Q8IZP0 508 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 AHI1Q8N157 1196 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 CFAP52Q8N1V2 620 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ATAD1Q8NBU5 361 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 TAMM41Q96BW9 452 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 COX4I2Q96KJ9 171 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PPP1R10Q96QC0 940 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 HNRNPABQ99729 332 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 MUC3BQ9H195 1237 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 AGO3Q9H9G7 860 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 SP110Q9HB58 689 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ABCB10Q9NRK6 738 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 MORF4L1Q9UBU8 362 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ACOT9Q9Y305 439 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 RAD54BQ9Y620 910 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 FUOMA2VDF0 154 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ERI2A8K979 691 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 I6L893 689 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PSMD11O00231 422 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 DPYSL4O14531 572 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 BIRC5O15392 142 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 NOBOXO60393 691 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 ADAM23O75077 832 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PAGE1O75459 146 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 GSRP00390 522 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PCSK1P29120 753 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 BMXP51813 675 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 RABL3Q5HYI8 236 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 USP50Q70EL3 339 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 CLIP4Q8N3C7 705 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 DQX1Q8TE96 717 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PBXIP1Q96AQ6 731 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 KCNA7Q96RP8 456 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 RERGLQ9H628 205 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 VRTNQ9H8Y1 702 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 RAB26Q9ULW5 256 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 PCDHB12Q9Y5F1 795 aa9.97□□□□□ -0.81
CDC42SE1-202ENST00000439374 LTBP3Q9NS15 1303 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 DAB1O75553 588 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 SIX3O95343 332 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 CPB1P15086 417 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 ATP6V1B2P21281 511 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 OXTRP30559 389 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 HOXD12P35452 270 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 MAGEA8P43361 318 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 NUP107P57740 925 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 CLCQ05315 142 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 NAPEPLDQ6IQ20 393 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 ADCY4Q8NFM4 1077 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 TUBGCP3Q96CW5 907 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 NPY6RQ99463 290 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 CPNE1Q99829 537 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 TBCDQ9BTW9 1192 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 NFKBIZQ9BYH8 718 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 SIAEQ9HAT2 523 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 TIMMDC1Q9NPL8 285 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 TMLHEQ9NVH6 421 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 GID8Q9NWU2 228 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms