RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 MUC20Q8N307 709 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 OR2C3Q8N628 320 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 CEP76Q8TAP6 659 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 TMEM255BQ8WV15 326 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 SLC35F5Q8WV83 523 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 HMGB4Q8WW32 186 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 C18orf8Q96DM3 657 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 HES6Q96HZ4 224 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 IGSF21Q96ID5 467 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 PRPF18Q99633 342 aaKnown RBP3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 HDHD5Q9BXW7 423 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 IL25Q9H293 177 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 SLC28A3Q9HAS3 691 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 Q9N2J8 555 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 OCIAD1Q9NX40 245 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 IGSF9Q9P2J2 1179 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 SLC39A10Q9ULF5 831 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 CNTN6Q9UQ52 1028 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 PCDHGB2Q9Y5G2 931 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 SRPRBQ9Y5M8 271 aaKnown RBP3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 MTCH2Q9Y6C9 303 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 PFASO15067 1338 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 AGAP5A6NIR3 686 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 UMODP07911 640 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 TRIM27P14373 513 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 KCNA5P22460 613 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 GMPSP49915 693 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 CDH12P55289 794 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 LY6DQ14210 128 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 ZRSR1Q15695 479 aaKnown RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 KIAA1324Q6UXG2 1013 aaKnown RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 MON1BQ7L1V2 547 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 RFLNBQ8N5W9 214 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 BADQ92934 168 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 GFM1Q96RP9 751 aaKnown RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 NPAS1Q99742 590 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 STK33Q9BYT3 514 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 TP63Q9H3D4 680 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 CERS4Q9HA82 394 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 LIN7CQ9NUP9 197 aaKnown RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 TMEM248Q9NWD8 314 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 CDH22Q9UJ99 828 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 SLC25A13Q9UJS0 675 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 PCDHA10Q9Y5I2 948 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 CCNB3Q8WWL7 1395 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 TGP01266 2768 aa3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 FAM208AQ9UK61 1670 aaKnown RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 SPTBN1Q01082 2364 aaKnown RBP3.07□□□□□ -1.92
HMGB1P18-201ENST00000438801 OTOGQ6ZRI0 2925 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 CSMD1Q96PZ7 3565 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 LINC01553A4QN01 128 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 HSPB6O14558 160 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 ASNA1O43681 348 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 BUB3O43684 328 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 SYNCRIPO60506 623 aaKnown RBP3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 IGLV2-11P01706 119 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 F7P08709 466 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 TSPY4P0CV99 314 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 TSPY10P0CW01 314 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 DAOP14920 347 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 PRPH2P23942 346 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 PRKCHP24723 683 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 GSTM2P28161 218 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 HOXD10P28358 340 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 TYK2P29597 1187 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 BNC1Q01954 994 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 LONRF1Q17RB8 773 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 BTBD16Q32M84 506 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 TRIM60Q495X7 471 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 ATG9BQ674R7 924 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 MAST2Q6P0Q8 1798 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 MED13LQ71F56 2210 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 RTTNQ86VV8 2226 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 GATAD2AQ86YP4 633 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 CCAR1Q8IX12 1150 aaKnown RBP3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 ADGRG4Q8IZF6 3080 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 MIGA1Q8NAN2 632 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 NEXN-AS1Q8NBZ9 246 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 PJA1Q8NG27 643 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 TMEM163Q8TC26 289 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 MUL1Q969V5 352 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 NODALQ96S42 347 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 PKP4Q99569 1192 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 UBE2ZQ9H832 354 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 PDE11AQ9HCR9 933 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 TCF7L2Q9NQB0 619 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 LZTS1Q9Y250 596 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 R4GN57 208 aa3.06□□□□□ -1.92
HMGB1P18-201ENST00000438801 TAF1P21675 1872 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 SPENQ96T58 3664 aaKnown RBP3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ITGB4P16144 1822 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ARFGEF2Q9Y6D5 1785 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 PLEKHH1Q9ULM0 1364 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ASTN2O75129 1339 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 IGLV5-52A0A0A0MRZ9 124 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 IGHV4-28A0A0C4DH34 117 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FAM90A18PA6NE21 464 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FAM90A16PA6NEW6 464 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FAM90A9PA6NNJ1 464 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms