RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 VTI1BQ9UEU0 232 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 EVLQ9UI08 416 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAGEA13PA6NCF6 341 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TBC1D3BA6NDS4 549 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 NEDD8-MDP1E9PL57 170 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CNTN5O94779 1100 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TSPAN8P19075 237 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CYP4F8P98187 520 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 CLLU1OSQ5K130 101 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 ADGRF1Q5T601 910 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 MARK2Q7KZI7 788 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 PIWIL4Q7Z3Z4 852 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 C14orf80Q86SX3 495 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TMPRSS6Q8IU80 811 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 SIGLEC10Q96LC7 697 aa11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 MRPL57Q9BQC6 102 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 URB1O60287 2271 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-202ENST00000438773 TMCC1O94876 653 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 DLG2Q15700 870 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 MPPE1Q53F39 396 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ADCK2Q7Z695 626 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 GPSM1Q86YR5 675 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 DCAKDQ8WVC6 231 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 PLD4Q96BZ4 506 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 IGSF21Q96ID5 467 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 OLFM3Q96PB7 478 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 SPATA16Q9BXB7 569 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ACTR8Q9H981 624 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 SAR1AQ9NR31 198 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 AK5Q9Y6K8 562 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 AGRPO00253 132 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 CCNT2O60583 730 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ACVRL1P37023 503 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 USP4Q13107 963 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 C11orf91Q3C1V1 193 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ACSBG2Q5FVE4 666 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 MS4A13Q5J8X5 152 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ERAP2Q6P179 960 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ALKAL1Q6UXT8 129 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 CAND1Q86VP6 1230 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■■■■■ 122.8
TRAPPC9-202ENST00000438773 DEFB107AQ8IZN7 70 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 PTGR2Q8N8N7 351 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 WDR60Q8WVS4 1066 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 CYGBQ8WWM9 190 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 CLPTM1LQ96KA5 538 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ELAC1Q9H777 363 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 A0A1W2PRU2 124 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 RAD51BO15315 384 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 KATNA1O75449 491 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 CSF2RAP15509 400 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 GJA1P17302 382 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 CST5P28325 142 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 MC4RP32245 332 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 SLC25A3Q00325 362 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 DSG1Q02413 1049 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 INSCQ1MX18 579 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 FNDC3BQ53EP0 1204 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 RTP2Q5QGT7 225 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 TSTD2Q5T7W7 516 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 LRRC74BQ6ZQY2 392 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 COLGALT2Q8IYK4 626 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 KCNN1Q92952 543 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 DNAJC1Q96KC8 554 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 SIKE1Q9BRV8 207 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 BTBD10Q9BSF8 475 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ADNPQ9H2P0 1102 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 SSU72Q9NP77 194 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 GID8Q9NWU2 228 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 TMEM216Q9P0N5 145 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 COPG2Q9UBF2 871 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 PCDHGB4Q9UN71 923 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 DOCK1Q14185 1865 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 PLIN3O60664 434 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 OAZ2O95190 189 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 CYP11A1P05108 521 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 HNRNPLP14866 589 aaKnown RBP eCLIP11.6□□□□□ -0.555e-7■■■■□ 21.6
TRAPPC9-202ENST00000438773 MSH3P20585 1137 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 PPP3CCP48454 512 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 HSPA14Q0VDF9 509 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 FLOT2Q14254 428 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 LIPMQ5VYY2 423 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 TP53INP2Q8IXH6 220 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 NKAPQ8N5F7 415 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZMIZ2Q8NF64 920 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZSCAN18Q8TBC5 510 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 INPP5DQ92835 1189 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 DACT3Q96B18 629 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ACOX2Q99424 681 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 PIF1Q9H611 641 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZNF510Q9Y2H8 683 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 DTNAQ9Y4J8 743 aa11.6□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAP1BP46821 2468 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms