RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FAM81AQ8TBF8 368 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 NCSTNQ92542 709 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 PPP2R3CQ969Q6 453 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 S100A14Q9HCY8 104 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 TREX1Q9NSU2 369 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 FNIP2Q9P278 1114 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 ANKRD6Q9Y2G4 727 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 INSL5Q9Y5Q6 135 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 PLXNA4Q9HCM2 1894 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 CCL22O00626 93 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 LINC00271P0C7V0 271 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 TACR2P21452 398 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 SERPINB5P36952 375 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 NDST2P52849 883 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 TAS2R39P59534 338 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 DSC2Q02487 901 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 ZNF789Q5FWF6 425 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 CNSTQ6PJW8 725 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 TCEAL8Q8IYN2 117 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 PSMG2Q969U7 264 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 TRMT2BQ96GJ1 504 aaKnown RBP13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 NUF2Q9BZD4 464 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 ZBP1Q9H171 429 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 TCF7L2Q9NQB0 619 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 PRKAG2Q9UGJ0 569 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 TBC1D30Q9Y2I9 924 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 C2orf78A6NCI8 922 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 DRGXA6NNA5 263 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 TXNDC9O14530 226 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 PEX11BO96011 259 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 APOA4P06727 396 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 MYL4P12829 197 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 PAMP19021 973 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 ETFBP38117 255 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 HTRA4P83105 476 aaPredicted RBP13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 FPGSQ05932 587 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 LSAMPQ13449 338 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 RBM20Q5T481 1227 aaKnown RBP13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 FBXL19Q6PCT2 694 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 KLHDC10Q6PID8 442 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 TMC7Q7Z402 723 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 DNAJB7Q7Z6W7 309 aaPredicted RBP13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 RNF135Q8IUD6 432 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 LGI2Q8N0V4 545 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 CCNYL1Q8N7R7 359 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 CMTM5Q96DZ9 223 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 PREBQ9HCU5 417 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 MID2Q9UJV3 735 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 FBXO5Q9UKT4 447 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 hCG_2014768A0A024R1R8 64 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 F5H5T6 163 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 DLX3O60479 287 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 LILRB3O75022 631 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 GJB3O75712 270 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 JUNP05412 331 aaKnown RBP13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 SLC6A4P31645 630 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 CD151P48509 253 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 EPHB3P54753 998 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 CCNIQ14094 377 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 IHHQ14623 411 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 PABPC1LQ4VXU2 614 aaKnown RBP13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 TCHHL1Q5QJ38 904 aaPredicted RBP13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 TMCO4Q5TGY1 634 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 NEPROQ6NW34 567 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 UBE2Q1Q7Z7E8 422 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 DHDDSQ86SQ9 333 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 LRRC49Q8IUZ0 686 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 CFAP52Q8N1V2 620 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 STYXQ8WUJ0 223 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 NAT14Q8WUY8 206 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 CENPKQ9BS16 269 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 DRC3Q9H069 523 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 RNF38Q9H0F5 515 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 SP110Q9HB58 689 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 GKN1Q9NS71 199 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 ZDHHC2Q9UIJ5 367 aa13.94□□□□□ -0.18
PTCHD3-201ENST00000438700 NEMP2A6NFY4 417 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 MATN2O00339 956 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 ACSL4O60488 711 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 H2AFYO75367 372 aaKnown RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 CSPG5O95196 566 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 CNPP09543 421 aaKnown RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 VCLP18206 1134 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 RPL14P50914 215 aaKnown RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 MED21Q13503 144 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 MARC1Q5VT66 337 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 SEL1L3Q68CR1 1132 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 KDELC1Q6UW63 502 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 LDB1Q86U70 411 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 DENND1CQ8IV53 801 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 KLHL23Q8NBE8 558 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 C2CD4AQ8NCU7 369 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 GDPD5Q8WTR4 605 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 SLC25A51Q9H1U9 297 aa13.93□□□□□ -0.18
PTCHD3-201ENST00000438700 RAP2CQ9Y3L5 183 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms