RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SCAMP1O15126 338 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 CKMT2P17540 419 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 CTNNA1P35221 906 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 BLKP51451 505 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 RPL26P61254 145 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 ZBTB17Q13105 803 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 EIF2B5Q13144 721 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 CNGA3Q16281 694 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 PPP2R5EQ16537 467 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 ZNF548Q8NEK5 533 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 KIAA1524Q8TCG1 905 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 P3H4Q92791 437 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 TBATAQ96M53 351 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 CNTNAP3BQ96NU0 1288 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 CNTNAP3Q9BZ76 1288 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 SLC13A1Q9BZW2 595 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 LACRTQ9GZZ8 138 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 SPASTQ9UBP0 616 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 APOBEC3BQ9UH17 382 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 RPL26L1Q9UNX3 145 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 MSRB2Q9Y3D2 182 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 DUSP10Q9Y6W6 482 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 ACACBO00763 2458 aa24.79■■□□□ 1.56
RAPGEF1-206ENST00000438647 hCG_1818297A0A087WSY0 165 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 FFAR2O15552 330 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 SIGLEC6O43699 453 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 PDHA1P08559 390 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 MARCKSL1P49006 195 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 GSDMDP57764 484 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 COPS2P61201 443 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 PPARDQ03181 441 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 KIF5AQ12840 1032 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 NFATC4Q14934 902 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 CCDC157Q569K6 752 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 PHACTR4Q8IZ21 702 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 KRT35Q92764 455 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 NUS1Q96E22 293 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 COQ10AQ96MF6 247 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 SEPT10Q9P0V9 454 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 KLK13Q9UKR3 277 aa24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 ARID1BQ8NFD5 2236 aaPredicted RBP24.78■■□□□ 1.56
RAPGEF1-206ENST00000438647 CEP295Q9C0D2 2601 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 A0A0J9YYE9 177 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 CCDC66A2RUB6 948 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 FAM221BA6H8Z2 402 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 NPIPB15A6NHN6 443 aaPredicted RBP24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 CACNB4O00305 520 aaPredicted RBP24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 TRIM38O00635 465 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 AQP9O43315 295 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 RFPL3O75679 317 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 TRBC1P01850 177 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 ZNF30P17039 623 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 CTPS1P17812 591 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 NIPAL4Q0D2K0 466 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 DNAJC3Q13217 504 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 ILKQ13418 452 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 PROX2Q3B8N5 592 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 FAXCQ5TGI0 409 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 ESRP1Q6NXG1 681 aaKnown RBP24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 GALNT15Q8N3T1 639 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 CNTD1Q8N815 330 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 TFB1MQ8WVM0 346 aaKnown RBP24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 PCDH9Q9HC56 1237 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 EVA1BQ9NVM1 165 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 KLF15Q9UIH9 416 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 CHKBQ9Y259 395 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 OR1A2Q9Y585 309 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 PCDHA3Q9Y5H8 950 aa24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 TDRD6O60522 2096 aaKnown RBP24.77■■□□□ 1.56
RAPGEF1-206ENST00000438647 MTSS1O43312 755 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 GM2AP17900 193 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 LHCGRP22888 699 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 KELP23276 732 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 CETN2P41208 172 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 CD86P42081 329 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 ACADVLP49748 655 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 DAB2P98082 770 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 LLGL1Q15334 1064 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 DENND2CQ68D51 928 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 LMX1AQ8TE12 382 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 DTD2Q96FN9 168 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 WDR92Q96MX6 357 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 AGAP3Q96P47 875 aa24.76■■□□□ 1.55
RAPGEF1-206ENST00000438647 CHD8Q9HCK8 2581 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 PDE2AO00408 941 aaPredicted RBP24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 HOXC4P09017 264 aaPredicted RBP24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 ALPIP09923 528 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 GIMD1P0DJR0 217 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 CTNNA2P26232 953 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 HNF1BP35680 557 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 TRIM23P36406 574 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 KIAA1024LP59773 190 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 PRKD1Q15139 912 aaPredicted RBP24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 TEX44Q53QW1 395 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 PRRT3Q5FWE3 981 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 PNCKQ6P2M8 343 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 ENPP7Q6UWV6 458 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 NT5DC3Q86UY8 548 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 SYCE1Q8N0S2 351 aa24.75■■□□□ 1.55
RAPGEF1-206ENST00000438647 CBARPQ8N350 705 aaPredicted RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms