RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CCL11P51671 97 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 SLC39A14Q15043 492 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 TMEM71Q6P5X7 295 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 DNAJC14Q6Y2X3 702 aaPredicted RBP12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 BEND5Q7L4P6 421 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ESX1Q8N693 406 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 OR56A4Q8NGH8 313 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ZDHHC1Q8WTX9 485 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 USP28Q96RU2 1077 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 POPDC2Q9HBU9 364 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ANLNQ9NQW6 1124 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ASF1BQ9NVP2 202 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 DDIT4Q9NX09 232 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 MPP6Q9NZW5 540 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 KIAA1257Q9ULG3 409 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 PCSK5Q92824 1860 aa12.35□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 PIPSLA2A3N6 862 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 A6NCN8 305 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ANKUB1A6NFN9 424 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 PRSS44E7EML9 344 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 I6L893 689 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 PPP6R2O75170 966 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 NR2F2P24468 414 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 RPL34P49207 117 aaKnown RBP12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 DNM1Q05193 864 aaKnown RBP12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 LRMPQ12912 555 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 SQSTM1Q13501 440 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 SLC6A19Q695T7 634 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 TMEM270Q6UE05 265 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ZNF761Q86XN6 746 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ZNF683Q8IZ20 524 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 IQUBQ8NA54 791 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 KIAA1524Q8TCG1 905 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ARHGEF26Q96DR7 871 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 KCTD15Q96SI1 283 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 FBXO8Q9NRD0 319 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 PDP2Q9P2J9 529 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 MOSPD1Q9UJG1 213 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 POLEQ07864 2286 aa12.34□□□□□ -0.43
SMAD9-IT1-201ENST00000437983 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 INPP4BO15327 924 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 CREG1O75629 220 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 SLC2A3P11169 496 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 AK4P27144 223 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 GTF2H1P32780 548 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 GPD2P43304 727 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 GPR3P46089 330 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 YWHAZP63104 245 aaKnown RBP12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 PAPD7Q5XG87 772 aaKnown RBP12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 RETSATQ6NUM9 610 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ARHGAP22Q7Z5H3 698 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 SETD3Q86TU7 594 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 DEFB106AQ8N104 65 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 GALNT6Q8NCL4 622 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ATL2Q8NHH9 583 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ZPBPQ9BS86 351 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 LGR4Q9BXB1 951 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 TAAR2Q9P1P5 351 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 PHTF1Q9UMS5 762 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 PCDHGA9Q9Y5G4 932 aaKnown RBP12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 E5RJQ4 531 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 SART1O43290 800 aaKnown RBP12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 CALUO43852 315 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 NFKBIAP25963 317 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 OR1E1P30953 314 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 CDK17Q00537 523 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 SLC20A2Q08357 652 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 NME3Q13232 169 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 BIRC2Q13490 618 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 MAP7Q14244 749 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ZRSR2Q15696 482 aaKnown RBP12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 TMEM52BQ4KMG9 183 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ARTNQ5T4W7 220 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ATXN7L2Q5T6C5 722 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 SHC4Q6S5L8 630 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 C6orf15Q6UXA7 325 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 GDPD4Q6W3E5 623 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 SPNS3Q6ZMD2 512 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 LEKR1Q6ZMV7 388 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 NAGSQ8N159 534 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 CISD2Q8N5K1 135 aaKnown RBP12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 RUFY1Q96T51 708 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ULBP3Q9BZM4 244 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ATP13A1Q9HD20 1204 aa12.32□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 ARGFXA6NJG6 315 aa12.31□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 DRGXA6NNA5 263 aa12.31□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 POLR1CO15160 346 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-IT1-201ENST00000437983 POLR2DO15514 142 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms