RNA–Protein interactions for RNA: ENST00000437733.5

TRAPPC12-208, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 518 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-208ENST00000437733 NOP53Q9NZM5 478 aaKnown RBP6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 ZNF180Q9UJW8 692 aa6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 SOX13Q9UN79 622 aa6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 SMG5Q9UPR3 1016 aaKnown RBP6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 TBC1D30Q9Y2I9 924 aa6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 SPEF1Q9Y4P9 236 aa6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 GPC6Q9Y625 555 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 NUP210Q8TEM1 1887 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC12-208ENST00000437733 DOCK6Q96HP0 2047 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 NOTCH4Q99466 2003 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 A0A0D9SEW6 157 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 FAM237BA0A1B0GVD1 139 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 A0A1W2PPM1 405 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 FAM47DPA6NHR8 397 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SRRM3A6NNA2 597 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 C1QTNF9BB2RNN3 333 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 TRIM49D1C9J1S8 452 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CBX4O00257 560 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ZNF197O14709 1029 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 PRPF4O43172 522 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SPAG7O75391 227 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 FAM155BO75949 473 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 USP1O94782 785 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 C1QAP02745 245 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CYBBP04839 570 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 RHOP08100 348 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MMP2P08253 660 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SNRPAP09012 282 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 POU2F2P09086 479 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CREB1P16220 341 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CES1P23141 567 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CNTFP26441 200 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 AVPR1AP37288 418 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CCR2P41597 374 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 NUMBP49757 651 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 PCBP4P57723 403 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MAXP61244 160 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 NIPAL4Q0D2K0 466 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CDH18Q13634 790 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CAMK1Q14012 370 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SLC14A2Q15849 920 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SEPT7Q16181 437 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ANKRD20A4Q4UJ75 823 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 STXBP5Q5T5C0 1151 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ARMC3Q5W041 872 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 DENND5AQ6IQ26 1287 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CES3Q6UWW8 571 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 RANBP10Q6VN20 620 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 KDELC2Q7Z4H8 507 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 RBM23Q86U06 439 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ZBTB46Q86UZ6 589 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CD163Q86VB7 1156 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 TAX1BP1Q86VP1 789 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MFN1Q8IWA4 741 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 BBS7Q8IWZ6 715 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CMTM8Q8IZV2 173 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 C4orf33Q8N1A6 199 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 PGBD5Q8N414 524 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CPXM2Q8N436 756 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SLC25A41Q8N5S1 370 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 TDRD5Q8NAT2 981 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 OR52K2Q8NGK3 314 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SH3RF2Q8TEC5 729 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 DDI1Q8WTU0 396 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MTBPQ96DY7 904 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 TCEAL4Q96EI5 215 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CERS2Q96G23 380 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SEMA3CQ99985 751 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ACE2Q9BYF1 805 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 LMAN2LQ9H0V9 348 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SMG9Q9H0W8 520 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 EPN3Q9H201 632 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 TASP1Q9H6P5 420 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 PIDD1Q9HB75 910 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MRM3Q9HC36 420 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SSU72Q9NP77 194 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 SMYD2Q9NRG4 433 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ZDHHC7Q9NXF8 308 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MOCS1Q9NZB8 636 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MARK1Q9P0L2 795 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ZFATQ9P243 1243 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 TXNDC16Q9P2K2 825 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 DNMT3BQ9UBC3 853 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 MSRAQ9UJ68 235 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 VPS28Q9UK41 221 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 ARHGAP26Q9UNA1 814 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 YBX2Q9Y2T7 364 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 HCN4Q9Y3Q4 1203 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 FAM169AQ9Y6X4 670 aa6.38□□□□□ -1.39
TRAPPC12-208ENST00000437733 CCDC195A0A1B0GUA6 201 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 HEATR9A2RTY3 570 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 GMNCA6NCL1 334 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 GFRA2O00451 464 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 PER2O15055 1255 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 UGT1A9O60656 530 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 MOSPD3O75425 235 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 RNASEH2AO75792 299 aaKnown RBP6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 ZWINTO95229 277 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 SERPINF2P08697 491 aa6.37□□□□□ -1.39
TRAPPC12-208ENST00000437733 ERVK-10P10266 1014 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms