RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 KRT38O76015 456 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 BAG4O95429 457 aaKnown RBP3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 TNNT1P13805 278 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 VEGFAP15692 232 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 HOXC13P31276 330 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 HNRNPH1P31943 449 aaKnown RBP3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 CCT5P48643 541 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 PPIGQ13427 754 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 SMAD1Q15797 465 aaKnown RBP3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZNF876PQ49A33 203 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 FBXO43Q4G163 708 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 SH2D4BQ5SQS7 431 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 KRBA2Q6ZNG9 492 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZNF497Q6ZNH5 498 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 PARP16Q8N5Y8 322 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 MYCT1Q8N699 235 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 CADM4Q8NFZ8 388 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 BBS10Q8TAM1 723 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 GDPD5Q8WTR4 605 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 HSPH1Q92598 858 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 TRIM63Q969Q1 353 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 ALG14Q96F25 216 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZNF583Q96ND8 569 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 SCLT1Q96NL6 688 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 LITAFQ99732 161 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 POLR3GLQ9BT43 218 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 PAGR1Q9BTK6 254 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 G6PC2Q9NQR9 355 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 PBRM1Q86U86 1689 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 RSF1Q96T23 1441 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 DVL1O14640 695 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 CREB3O43889 395 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 PIP5K1CO60331 668 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 MTA2O94776 668 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 HLA-DOBP13765 273 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 HSD3B1P14060 373 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 SRD5A1P18405 259 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 GPTP24298 496 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 DVL1P1P54792 670 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 DRG2P55039 364 aaKnown RBP3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 RUNX2Q13950 521 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 PRKG1Q13976 671 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 ESCO2Q56NI9 601 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 HSP90AB4PQ58FF6 505 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 ZNF484Q5JVG2 852 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 IL20RBQ6UXL0 311 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 CERS3Q8IU89 383 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 CPXCR1Q8N123 301 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 ADAD2Q8NCV1 583 aaKnown RBP3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 MYRIPQ8NFW9 859 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 PPM1EQ8WY54 764 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 LGALS12Q96DT0 336 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 KXD1Q9BQD3 176 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 CHMP4AQ9BY43 222 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 CSTL1Q9H114 145 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 TAF1DQ9H5J8 278 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 TTC12Q9H892 705 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 C17orf75Q9HAS0 396 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 PLEKHA5Q9HAU0 1116 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 SAYSD1Q9NPB0 183 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 TLR8Q9NR97 1041 aaKnown RBP3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 PCDHGB5Q9Y5G0 923 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 HECW2Q9P2P5 1572 aa3.15□□□□□ -1.91
HMGB1P31-201ENST00000437242 TOP2AP11388 1531 aaKnown RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 DNMBPQ6XZF7 1577 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 IRAK2O43187 625 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 DHX16O60231 1041 aaKnown RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 TUBBP07437 444 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 ZNF8P17098 575 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 CD58P19256 250 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 ZNF10P21506 573 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 CST5P28325 142 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 CHATP28329 748 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 HNF1BP35680 557 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 USP8P40818 1118 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 TMPOP42166 694 aaKnown RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 ARL4CP56559 192 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 TUBB4BP68371 445 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 EDRF1Q3B7T1 1238 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 ARHGAP17Q68EM7 881 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 LDHAL6AQ6ZMR3 332 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 SMAP1Q8IYB5 467 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 LYG1Q8N1E2 194 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 GJC3Q8NFK1 279 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 LINS1Q8NG48 757 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 OR10V1Q8NGI7 309 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 OR6Y1Q8NGX8 325 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 SDCCAG3Q96C92 435 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 RNFT2Q96EX2 444 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 MASTLQ96GX5 879 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 ZC3HAV1LQ96H79 300 aaKnown RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 RBM17Q96I25 401 aaKnown RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 FAM118AQ9NWS6 357 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 CISD1Q9NZ45 108 aaKnown RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 LUZP4Q9P127 313 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 GRHPRQ9UBQ7 328 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 RALYQ9UKM9 306 aaKnown RBP3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 KCNK7Q9Y2U2 307 aa3.14□□□□□ -1.91
HMGB1P31-201ENST00000437242 DGKBQ9Y6T7 804 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms