RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 KIAA0408Q6ZU52 694 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 CDKN2AIPNLQ96HQ2 116 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 ZNF395Q9H8N7 513 aaPredicted RBP21.17■□□□□ 0.98
PTPRF-207ENST00000436724 SIRPGQ9P1W8 387 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 STARD13Q9Y3M8 1113 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 CTPS1P17812 591 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 TAS2R39P59534 338 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 AP1S1P61966 158 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 KCNC3Q14003 757 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 SNCBQ16143 134 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 INSCQ1MX18 579 aa21.17■□□□□ 0.98
PTPRF-207ENST00000436724 RYBPQ8N488 228 aaPredicted RBP21.17■□□□□ 0.98
PTPRF-207ENST00000436724 S1PR4O95977 384 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 POU2F2P09086 479 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 ALPIP09923 528 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 PABPC1P11940 636 aaKnown RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 WEE1P30291 646 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 HADHAP40939 763 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 EPHB1P54762 984 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 NCALDP61601 193 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 BNIP1Q12981 228 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 SLC12A1Q13621 1099 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 LAMB3Q13751 1172 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 TAF1AQ15573 450 aaPredicted RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 FASTKD1Q53R41 847 aaKnown RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 ELMSAN1Q6PJG2 1045 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 SPATA6LQ8N4H0 392 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 FITM2Q8N6M3 262 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 PEX13Q92968 403 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 OMDQ99983 421 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 TSSK1BQ9BXA7 367 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 UNKQ9C0B0 810 aaKnown RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 BPIFA1Q9NP55 256 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 NLE1Q9NVX2 485 aaPredicted RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 SLCO3A1Q9UIG8 710 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 FNDC3AQ9Y2H6 1198 aaKnown RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 CRYL1Q9Y2S2 319 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 CD3EAPO15446 510 aaKnown RBP21.16■□□□□ 0.98
PTPRF-207ENST00000436724 GLP2RO95838 553 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 BST1Q10588 318 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 PCLAFQ15004 111 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 OR4L1Q8NH43 312 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 E2F7Q96AV8 911 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 RMDN2Q96LZ7 410 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 OLFM1Q99784 485 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 SLC28A3Q9HAS3 691 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 TLK1Q9UKI8 766 aa21.16■□□□□ 0.98
PTPRF-207ENST00000436724 C2orf81A6NN90 581 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 TRAFD1O14545 582 aaPredicted RBP21.15■□□□□ 0.98
PTPRF-207ENST00000436724 STMN1P16949 149 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 ALDH3A1P30838 453 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 RAB10P61026 200 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 ACCSLQ4AC99 568 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 TCEAL5Q5H9L2 206 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 RARS2Q5T160 578 aaKnown RBP21.15■□□□□ 0.98
PTPRF-207ENST00000436724 TMEM215Q68D42 235 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 TBC1D1Q86TI0 1168 aaPredicted RBP21.15■□□□□ 0.98
PTPRF-207ENST00000436724 ADIPOR2Q86V24 386 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 CELF5Q8N6W0 485 aaKnown RBP21.15■□□□□ 0.98
PTPRF-207ENST00000436724 KCTD4Q8WVF5 259 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 VOPP1Q96AW1 172 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 GRAMD1AQ96CP6 724 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 MYO19Q96H55 970 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 C1QTNF1Q9BXJ1 281 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 C20orf27Q9GZN8 174 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 POLR3BQ9NW08 1133 aaPredicted RBP21.15■□□□□ 0.98
PTPRF-207ENST00000436724 HS3ST2Q9Y278 367 aa21.15■□□□□ 0.98
PTPRF-207ENST00000436724 SPTBN5Q9NRC6 3674 aaKnown RBP21.15■□□□□ 0.98
PTPRF-207ENST00000436724 PGLSO95336 258 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 GLRBP48167 497 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 BCL2L1Q07817 233 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 ARMC12Q5T9G4 340 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 NPAS3Q8IXF0 933 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 CENPLQ8N0S6 344 aaPredicted RBP21.14■□□□□ 0.98
PTPRF-207ENST00000436724 OR2AP1Q8NGE2 309 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 PIH1D2Q8WWB5 315 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 ASIC4Q96FT7 647 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 ZFYVE19Q96K21 471 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 PLCD4Q9BRC7 762 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 ECT2Q9H8V3 914 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 SFXN1Q9H9B4 322 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 NPHS2Q9NP85 383 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 CPSF2Q9P2I0 782 aaKnown RBP21.14■□□□□ 0.98
PTPRF-207ENST00000436724 MSRAQ9UJ68 235 aa21.14■□□□□ 0.98
PTPRF-207ENST00000436724 MTF2Q9Y483 593 aaPredicted RBP21.14■□□□□ 0.98
PTPRF-207ENST00000436724 CFAP73A6NFT4 308 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 CCDC85CA6NKD9 419 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 HGSO14964 777 aaPredicted RBP21.14■□□□□ 0.97
PTPRF-207ENST00000436724 BIRC5O15392 142 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 IGSF6O95976 241 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 TCF3P15923 654 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 LPOP22079 712 aaPredicted RBP21.14■□□□□ 0.97
PTPRF-207ENST00000436724 RALGPS1Q5JS13 557 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 FAM78AQ5JUQ0 283 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 C10orf107Q8IVU9 208 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 PAF1Q8N7H5 531 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 SORCS1Q8WY21 1168 aa21.14■□□□□ 0.97
PTPRF-207ENST00000436724 EID2BQ96D98 161 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms