RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 C11orf57Q6ZUT1 292 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 NEK8Q86SG6 692 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ZNF227Q86WZ6 799 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 DHX40Q8IX18 779 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 ST13P4Q8IZP2 240 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 ADGRG2Q8IZP9 1017 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 SYCE1Q8N0S2 351 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 AGGF1Q8N302 714 aaeCLIP5.59□□□□□ -1.51
RFC3-202ENST00000434425 SFRP1Q8N474 314 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 FSIP1Q8NA03 581 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 GLB1L3Q8NCI6 653 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 OR8K5Q8NH50 307 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 FAM71BQ8TC56 605 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 PDCD6IPQ8WUM4 868 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 SCFD1Q8WVM8 642 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 DNAJA4Q8WW22 397 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 THAP4Q8WY91 577 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 SLC5A5Q92911 643 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ZNF837Q96EG3 531 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 SIPA1Q96FS4 1042 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CHMP6Q96FZ7 201 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CCDC17Q96LX7 622 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 FER1L6-AS2Q96M78 137 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ALS2CR12Q96Q35 445 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 RAB3IPQ96QF0 476 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 TWNKQ96RR1 684 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 TEX12Q9BXU0 123 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 KATNBL1Q9H079 304 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 NAT10Q9H0A0 1025 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 UPF3AQ9H1J1 476 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 SLC26A1Q9H2B4 701 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 MUC13Q9H3R2 512 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 ABHD16BQ9H3Z7 469 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 SH2D4AQ9H788 454 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 C11orf16Q9NQ32 467 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 FAM120CQ9NX05 1096 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 TRNAU1APQ9NX07 287 aaKnown RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 IMPACTQ9P2X3 320 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 COPG2Q9UBF2 871 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CRNNQ9UBG3 495 aaPredicted RBP5.59□□□□□ -1.51
RFC3-202ENST00000434425 BAIAP2L1Q9UHR4 511 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 POMT1Q9Y6A1 747 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 CFAP54Q96N23 3096 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 TET1Q8NFU7 2136 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 MYH4Q9Y623 1939 aa5.59□□□□□ -1.51
RFC3-202ENST00000434425 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CCDC154A6NI56 674 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 METTL12A8MUP2 240 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ZBTB42B2RXF5 422 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PTGES3LE9PB15 166 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 F5H6K3 240 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PCDH17O14917 1159 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PPP6R2O75170 966 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CRCPO75575 148 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 IL18RAPO95256 599 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PDGFBP01127 241 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 ZCCHC18P0CG32 403 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ERVK-10P10266 1014 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ODC1P11926 461 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PTAFRP25105 342 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 RRM2P31350 389 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 BMXP51813 675 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 DLG4P78352 724 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ROR2Q01974 943 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 CNTN2Q02246 1040 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 KLRC3Q07444 240 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SPEM2Q0P670 501 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SMARCB1Q12824 385 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 POU4F3Q15319 338 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TBCEQ15813 527 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 TBCCQ15814 346 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 FAM187BQ17R55 369 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 NKAIN1Q4KMZ8 207 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SGO2Q562F6 1265 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ZNF628Q5EBL2 1059 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TMEM63BQ5T3F8 832 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CLEC6AQ6EIG7 209 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 FIGNL1Q6PIW4 674 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 CXCL17Q6UXB2 119 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 NSMFQ6X4W1 530 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 UNC5AQ6ZN44 842 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ATG14Q6ZNE5 492 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PLPPR4Q7Z2D5 763 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 DSG4Q86SJ6 1040 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ARMC8Q8IUR7 673 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 C17orf53Q8N3J3 647 aaPredicted RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 RASGEF1CQ8N431 466 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 IQUBQ8NA54 791 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TMEM145Q8NBT3 493 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 SETD9Q8NE22 299 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 OR8K1Q8NGG5 319 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 DNAJB8Q8NHS0 232 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 TEX47Q8TBZ9 253 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 IGDCC4Q8TDY8 1250 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 LMBR1Q8WVP7 490 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 ASZ1Q8WWH4 475 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 OR1E3Q8WZA6 343 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 PMEPA1Q969W9 287 aa5.58□□□□□ -1.52
RFC3-202ENST00000434425 GTPBP3Q969Y2 492 aaKnown RBP5.58□□□□□ -1.52
RFC3-202ENST00000434425 RMDN1Q96DB5 314 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms