RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PFN3P60673 137 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 CNGA3Q16281 694 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 WSCD2Q2TBF2 565 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 USP45Q70EL2 814 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 DCP2Q8IU60 420 aaKnown RBP18.43■□□□□ 0.54
HLA-F-220ENST00000434407 SLC22A18ASQ8N1D0 253 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 PAF1Q8N7H5 531 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 COQ10AQ96MF6 247 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 LYSMD1Q96S90 227 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 RBM15Q96T37 977 aaKnown RBP eCLIP18.43■□□□□ 0.54
HLA-F-220ENST00000434407 ELF4Q99607 663 aaPredicted RBP18.43■□□□□ 0.54
HLA-F-220ENST00000434407 USP29Q9HBJ7 922 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 TRHDEQ9UKU6 1024 aa18.43■□□□□ 0.54
HLA-F-220ENST00000434407 A0A1B0GTQ1 180 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 PSMD11O00231 422 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 KCNK3O14649 394 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 FPGTO14772 594 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 ZNF189O75820 626 aaPredicted RBP18.42■□□□□ 0.54
HLA-F-220ENST00000434407 RABIFP47224 123 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 LRRC14Q15048 493 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 SHBQ15464 509 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 UAP1L1Q3KQV9 507 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 SEL1L2Q5TEA6 688 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 Q6ZSR6 202 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 CDKL3Q8IVW4 592 aaPredicted RBP18.42■□□□□ 0.54
HLA-F-220ENST00000434407 NDUFAF2Q8N183 169 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 OXR1Q8N573 874 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 SPATA22Q8NHS9 363 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 SLC35B2Q8TB61 432 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 FCRL5Q96RD9 977 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 C10orf88Q9H8K7 445 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 MBNL1Q9NR56 388 aaKnown RBP18.42■□□□□ 0.54
HLA-F-220ENST00000434407 TM7SF3Q9NS93 570 aa18.42■□□□□ 0.54
HLA-F-220ENST00000434407 R3HDM2Q9Y2K5 976 aaKnown RBP18.42■□□□□ 0.54
HLA-F-220ENST00000434407 ZSCAN12O43309 604 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 PCDHGA12O60330 932 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 RECQL5O94762 991 aaPredicted RBP18.41■□□□□ 0.54
HLA-F-220ENST00000434407 MT-CYBP00156 380 aaPredicted RBP18.41■□□□□ 0.54
HLA-F-220ENST00000434407 ALPIP09923 528 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 CSRP1P21291 193 aaKnown RBP18.41■□□□□ 0.54
HLA-F-220ENST00000434407 HNF1BP35680 557 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 PTPRRQ15256 657 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 IRF4Q15306 451 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 QPCTQ16769 361 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 CRTC1Q6UUV9 634 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 PID1Q7Z2X4 250 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 SLC13A5Q86YT5 568 aaPredicted RBP18.41■□□□□ 0.54
HLA-F-220ENST00000434407 IFT43Q96FT9 208 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 FAM118BQ9BPY3 351 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 KCTD5Q9NXV2 234 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 KLHL8Q9P2G9 620 aaPredicted RBP18.41■□□□□ 0.54
HLA-F-220ENST00000434407 FAM153AQ9UHL3 310 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 DNPEPQ9ULA0 475 aa18.41■□□□□ 0.54
HLA-F-220ENST00000434407 SPTY2D1-AS1A0A0U1RR47 76 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 DCDC2BA2VCK2 349 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 CAPN8A6NHC0 703 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 A8MX80 341 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 ANKRD66B4E2M5 251 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 YKT6O15498 198 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 LZTS3O60299 673 aaPredicted RBP18.4■□□□□ 0.54
HLA-F-220ENST00000434407 ZNF30P17039 623 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 CTPS1P17812 591 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 NFKB1P19838 968 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 CCT8P50990 548 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 EPHB1P54762 984 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 YPEL5P62699 121 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 CDKN3Q16667 212 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 DARS2Q6PI48 645 aaKnown RBP18.4■□□□□ 0.54
HLA-F-220ENST00000434407 KDELC1Q6UW63 502 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 PTAR1Q7Z6K3 402 aaPredicted RBP18.4■□□□□ 0.54
HLA-F-220ENST00000434407 TSPAN33Q86UF1 283 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 RAVER1Q8IY67 606 aaKnown RBP18.4■□□□□ 0.54
HLA-F-220ENST00000434407 LPCAT1Q8NF37 534 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 SMIM14Q96QK8 99 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 FERMT1Q9BQL6 677 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 ADGRE3Q9BY15 652 aa18.4■□□□□ 0.54
HLA-F-220ENST00000434407 LRP4O75096 1905 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 LOC285095A0A1B0GVY8 99 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 C5orf60A6NFR6 353 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 EPOP01588 193 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 TRIM23P36406 574 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 PTSQ03393 145 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 CDK18Q07002 472 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 MTM1Q13496 603 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 FZD2Q14332 565 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 ANKRD20A2Q5SQ80 823 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 PRAMEF14Q5SWL7 426 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 TPRG1LQ5T0D9 272 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 ANKRD20A1Q5TYW2 823 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 ANKRD20A3Q5VUR7 823 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 KDM7AQ6ZMT4 941 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 HSD11B1LQ7Z5J1 315 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 TECPR1Q7Z6L1 1165 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 KLHDC8BQ8IXV7 354 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 DTD2Q96FN9 168 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 OXNAD1Q96HP4 312 aaPredicted RBP18.39■□□□□ 0.53
HLA-F-220ENST00000434407 GORASP1Q9BQQ3 440 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 MLPHQ9BV36 600 aaPredicted RBP18.39■□□□□ 0.53
HLA-F-220ENST00000434407 FRMD8P1Q9BZ68 369 aaPredicted RBP18.39■□□□□ 0.53
HLA-F-220ENST00000434407 GBA3Q9H227 469 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms