RNA–Protein interactions for RNA: ENST00000434068.1

C1orf228-208, Transcript of Uncharacterized protein C1orf228, human

APPRIS ALT2 TSL 3

Gene C1orf228, Length 490 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-208	ENST00000434068	VIPR1	P32241	457 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	ACTN2	P35609	894 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	GARS	P41250	739 aa	Known RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	ABCG1	P45844	678 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	ARSE	P51690	589 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	SRP54	P61011	504 aa	Known RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	GALNT2	Q10471	571 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	TRAF2	Q12933	501 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	MMRN1	Q13201	1228 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	ACOX1	Q15067	660 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PAFAH1B3	Q15102	231 aa	Known RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	CNGA3	Q16281	694 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	KIF26B	Q2KJY2	2108 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	TSR1	Q2NL82	804 aa	Known RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	NCBP2-AS2	Q69YL0	99 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	C19orf48	Q6RUI8	117 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	ENPP7	Q6UWV6	458 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	USP45	Q70EL2	814 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	GKN2	Q86XP6	184 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	MAP7D3	Q8IWC1	876 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	SLC35F3	Q8IY50	421 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PGBD5	Q8N414	524 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	ARL10	Q8N8L6	244 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	KCTD6	Q8NC69	237 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PLA2G15	Q8NCC3	412 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	OR8K1	Q8NGG5	319 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	OR56A4	Q8NGH8	313 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PCDH19	Q8TAB3	1148 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	SNIP1	Q8TAD8	396 aa	Known RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	TSACC	Q96A04	125 aa	Predicted RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	GRAMD1A	Q96CP6	724 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PDXP	Q96GD0	296 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	DCBLD2	Q96PD2	775 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	POLR1E	Q9GZS1	481 aa	Known RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	TSPY26P	Q9H489	355 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	WDR26	Q9H7D7	661 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	NOD2	Q9HC29	1040 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	AMACR	Q9UHK6	382 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	RALY	Q9UKM9	306 aa	Known RBP	11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PHTF1	Q9UMS5	762 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PCDHB1	Q9Y5F3	818 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	PCDHGC4	Q9Y5F7	938 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	DGKB	Q9Y6T7	804 aa		11.13	□□□□□ -0.63
C1orf228-208	ENST00000434068	TTC24	A2A3L6	582 aa	Predicted RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	TNFRSF10C	O14798	259 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	RRP8	O43159	456 aa	Known RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	AKR1B10	O60218	316 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	MFAP3L	O75121	409 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	HEXIM1	O94992	359 aa	Known RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	PGLS	O95336	258 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	TNF	P01375	233 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	CELA2B	P08218	269 aa	Predicted RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	CD48	P09326	243 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	TMEM253	P0C7T8	217 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	MYCLP1	P12525	358 aa	Predicted RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	GM2A	P17900	193 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	TGM2	P21980	687 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	CA4	P22748	312 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	IL4R	P24394	825 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	TRIM23	P36406	574 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	MAX	P61244	160 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	IFI16	Q16666	785 aa	Known RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	TBC1D25	Q3MII6	688 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	ANKRD20A8P	Q5CZ79	823 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	ARMC12	Q5T9G4	340 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	ALG1L	Q6GMV1	187 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	LRRC69	Q6ZNQ3	347 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	RBM44	Q6ZP01	1051 aa	Known RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	RD3	Q7Z3Z2	195 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	PDZD3	Q86UT5	571 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	VSTM4	Q8IW00	320 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	LSMEM2	Q8N112	164 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	NDUFAF2	Q8N183	169 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	TEX26	Q8N6G2	289 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	KY	Q8NBH2	561 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	FATE1	Q969F0	183 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	FUBP1	Q96AE4	644 aa	Known RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	FAF2	Q96CS3	445 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	COQ10A	Q96MF6	247 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	NSMCE3	Q96MG7	304 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	ZNF830	Q96NB3	372 aa	Predicted RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	ANP32E	Q9BTT0	268 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	PACSIN1	Q9BY11	444 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	NT5M	Q9NPB1	228 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	ABHD10	Q9NUJ1	306 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	PADI4	Q9UM07	663 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	GPR34	Q9UPC5	381 aa		11.12	□□□□□ -0.63
C1orf228-208	ENST00000434068	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068		A8MX80	341 aa		11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	ZNF487	B1APH4	448 aa		11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	PDE2A	O00408	941 aa	Predicted RBP	11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	MATN3	O15232	486 aa		11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	TLX3	O43711	291 aa	Predicted RBP	11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	USP12	O75317	370 aa		11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	DXO	O77932	396 aa	Known RBP	11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	MX2	P20592	715 aa		11.11	□□□□□ -0.63
C1orf228-208	ENST00000434068	CES1	P23141	567 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms