RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 AKT2P31751 481 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 GPC1P35052 558 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CTNNA1P35221 906 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CD86P42081 329 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CTSKP43235 329 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ATP5OP48047 213 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 GRIA4P48058 902 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 LIMK1P53667 647 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 EPHB1P54762 984 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 RWDD2BP57060 319 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 AP1S1P61966 158 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CCZ1BP86790 482 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CCZ1P86791 482 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 PPIDQ08752 370 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 NIPAL4Q0D2K0 466 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ELP6Q0PNE2 266 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZBTB17Q13105 803 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 IHHQ14623 411 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ACOX1Q15067 660 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 PDK1Q15118 436 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 TLR1Q15399 786 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 PCSK7Q16549 785 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 PPM1JQ5JR12 505 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ARMC12Q5T9G4 340 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 KIAA1161Q6NSJ0 714 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 PSAPL1Q6NUJ1 521 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 IL27RAQ6UWB1 636 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 BZW1Q7L1Q6 419 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 PID1Q7Z2X4 250 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 SPATS2Q86XZ4 545 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 LRRC49Q8IUZ0 686 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 SYCE1Q8N0S2 351 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 TXLNBQ8N3L3 684 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 RNF10Q8N5U6 811 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 TEX26Q8N6G2 289 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CNTD1Q8N815 330 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 LRRC57Q8N9N7 239 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 MFSD2AQ8NA29 543 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 OR13H1Q8NG92 308 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ARRDC2Q8TBH0 407 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 RHBDD1Q8TEB9 315 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 TFB1MQ8WVM0 346 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 MAML1Q92585 1016 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ALG3Q92685 438 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 HDAC11Q96DB2 347 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 RBM41Q96IZ5 413 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 RBM15Q96T37 977 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 MGME1Q9BQP7 344 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 HERPUD2Q9BSE4 406 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 POLR1EQ9GZS1 481 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 UBP1Q9NZI7 540 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 DKK3Q9UBP4 350 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CD84Q9UIB8 345 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZMIZ1Q9ULJ6 1067 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 DMTF1Q9Y222 760 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 FNDC3AQ9Y2H6 1198 aaKnown RBP5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 ATP8A1Q9Y2Q0 1164 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 RAI2Q9Y5P3 530 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 HS3ST3A1Q9Y663 406 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 CAPN6Q9Y6Q1 641 aa5.8□□□□□ -1.48
HMGB3P24-201ENST00000433260 GON4LQ3T8J9 2241 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 GOLGA6CA6NDK9 693 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 GOLGA6BA6NDN3 693 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 C10orf142B7Z368 130 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 SCAMP1O15126 338 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 DDX3YO15523 660 aaKnown RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 PMPCBO75439 489 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 DKK1O94907 266 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 PGLSO95336 258 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 MT-CYBP00156 380 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 IL2RAP01589 272 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 ITGAVP06756 1048 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 GOLGA6DP0CG33 693 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 CYP2A6P11509 494 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 C6P13671 934 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 TGM2P21980 687 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 CES1P23141 567 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 PTPN3P26045 913 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 RBL1P28749 1068 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 HNF1BP35680 557 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 HSPA9P38646 679 aaKnown RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 CETN2P41208 172 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 NR2C2P49116 596 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 NOVA1P51513 510 aaKnown RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 THOP1P52888 689 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 NXPH1P58417 271 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 EIF3EP60228 445 aaKnown RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 OTUD4Q01804 1114 aaKnown RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 RALGDSQ12967 914 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 PDE1CQ14123 709 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 INPP5AQ14642 412 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 SUZ12Q15022 739 aaKnown RBP5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 LRRC14Q15048 493 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 SHBQ15464 509 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 TCEA2Q15560 299 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 TAZQ16635 292 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 TEX44Q53QW1 395 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 CCDC157Q569K6 752 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 TPRG1LQ5T0D9 272 aa5.79□□□□□ -1.48
HMGB3P24-201ENST00000433260 N4BP2L1Q5TBK1 243 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms