RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 RALGDSQ12967 914 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 DPYSQ14117 519 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 INPP5AQ14642 412 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 RFTN1Q14699 578 aaPredicted RBP9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 NFATC4Q14934 902 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ELOCQ15369 112 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ANO6Q4KMQ2 910 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 FAXCQ5TGI0 409 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ERAP2Q6P179 960 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 LVRNQ6Q4G3 990 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 RBM44Q6ZP01 1051 aaKnown RBP9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ZNF571Q7Z3V5 609 aaPredicted RBP9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 SDR16C5Q8N3Y7 309 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 FSTL5Q8N475 847 aaPredicted RBP9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ARL10Q8N8L6 244 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 WDR48Q8TAF3 677 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 GLMNQ92990 594 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ATXN7L3BQ96GX2 97 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 PRR11Q96HE9 360 aaPredicted RBP9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 LGMNQ99538 433 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 NAT10Q9H0A0 1025 aaKnown RBP9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 HAUS4Q9H6D7 363 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ATP13A3Q9H7F0 1226 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 TMEM63CQ9P1W3 806 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 PCSK1NQ9UHG2 260 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 SATB2Q9UPW6 733 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 OR1A2Q9Y585 309 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 PCDHGA8Q9Y5G5 932 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 ENTPD2Q9Y5L3 495 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 TENM4Q6N022 2769 aa9.47□□□□□ -0.89
CDC42-IT1-201ENST00000431803 A0A1B0GTH6 734 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TEX51A0A1B0GUA7 166 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 A0A1W2PQC6 194 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 DDX3XO00571 662 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TRAFD1O14545 582 aaPredicted RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CASC3O15234 703 aaKnown RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PRPSAP2O60256 369 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 C1QL1O75973 258 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RASGRP1O95267 797 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 FTLP02792 175 aaPredicted RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PRKCGP05129 697 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ALPIP09923 528 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 GM2AP17900 193 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 HTR1BP28222 390 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 IL10RBQ08334 325 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NSUN2Q08J23 767 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 MTM1Q13496 603 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ASIC2Q16515 512 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PPP6R3Q5H9R7 873 aaPredicted RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 C3orf38Q5JPI3 329 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CFAP58Q5T655 872 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 KCTD16Q68DU8 428 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ESRP1Q6NXG1 681 aaKnown RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CRTC1Q6UUV9 634 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ARHGAP36Q6ZRI8 547 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 GPR155Q7Z3F1 870 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SRLQ86TD4 932 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 HID1Q8IV36 788 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 KYQ8NBH2 561 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PLA2G15Q8NCC3 412 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 LSM14AQ8ND56 463 aaKnown RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PCDH19Q8TAB3 1148 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 TSACCQ96A04 125 aaPredicted RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PDXPQ96GD0 296 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 NSMCE3Q96MG7 304 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SLC46A1Q96NT5 459 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PSKH2Q96QS6 385 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RBM15Q96T37 977 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CCDC3Q9BQI4 270 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 APOOQ9BUR5 198 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CINPQ9BW66 212 aaPredicted RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 EDEM3Q9BZQ6 932 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SP110Q9HB58 689 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 THSD1Q9NS62 852 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CWC15Q9P013 229 aaKnown RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PADI4Q9UM07 663 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 DGKBQ9Y6T7 804 aa9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ASH1LQ9NR48 2969 aaKnown RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SETXQ7Z333 2677 aaKnown RBP9.46□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ANKRD36A6QL64 1941 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SHROOM3Q8TF72 1996 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PMS2P1A4D2B8 440 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 EIF4E1BA6NMX2 242 aaKnown RBP9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 CDRT15L2A8MXV6 281 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ESPNB1AK53 854 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 DFFAO00273 331 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 DAPK3O43293 454 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RNF8O76064 485 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 RECQL5O94762 991 aaPredicted RBP9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PEX11BO96011 259 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PCCBP05166 539 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 HOXC4P09017 264 aaPredicted RBP9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 MYBL1P10243 752 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 IL1R2P27930 398 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 PCK1P35558 622 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 UCNP55089 124 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 KIAA1024LP59773 190 aa9.45□□□□□ -0.9
CDC42-IT1-201ENST00000431803 SRP54P61011 504 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms