RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 RNF157Q96PX1 679 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 PRPF19Q9UMS4 504 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 TBC1D30Q9Y2I9 924 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 PPP2R3BQ9Y5P8 575 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 SLC28A2O43868 658 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 NKAPQ8N5F7 415 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 PPP3R2Q96LZ3 170 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 NMUR2Q9GZQ4 415 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 ZNF221Q9UK13 617 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 PCDHB12Q9Y5F1 795 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 ACKR2O00590 384 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 FBXL19Q6PCT2 694 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 MAP4K3Q8IVH8 894 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 EXOC2Q96KP1 924 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 PLLPQ9Y342 182 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 SPATA31A1Q5TZJ5 1347 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 BCKDKO14874 412 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 GMFGO60234 142 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 MGRN1O60291 552 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 TRIM3O75382 744 aaPredicted RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 DPEP1P16444 411 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CEBPGP53567 150 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CWF19L1Q69YN2 538 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 MEIOBQ8N635 442 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 RBM15BQ8NDT2 890 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 GNEQ9Y223 722 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 AP2A2O94973 939 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 MT-ND1P03886 318 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 MPSTP25325 297 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CLCN5P51795 746 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 NAA20P61599 178 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CNTN2Q02246 1040 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 ABRQ12979 859 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 FCRL4Q96PJ5 515 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CNOT6Q9ULM6 557 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CLDN5O00501 218 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ALOX5P09917 674 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TGFB2P61812 414 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 C5orf22Q49AR2 442 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 RAP1GAP2Q684P5 730 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ZNF613Q6PF04 617 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 AFTPHQ6ULP2 937 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ASB7Q9H672 318 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ACSS3Q9H6R3 686 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 STX16-NPEPL1H3BU86 382 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 SLC28A1O00337 649 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 STX16O14662 325 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 MAGEC1O60732 1142 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PTPN1P18031 435 aaKnown RBP11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TNFSF9P41273 254 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 GMFBP60983 142 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 MBTD1Q05BQ5 628 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 OGFOD2Q6N063 350 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ULK3Q6PHR2 472 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PALB2Q86YC2 1186 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PGRMC2O15173 223 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 OR10H2O60403 315 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PQBP1O60828 265 aaKnown RBP11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 SLC25A12O75746 678 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 BMP7P18075 431 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PRKG2Q13237 762 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 FSCN1Q16658 493 aaKnown RBP11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TCEAL5Q5H9L2 206 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TRABD2AQ86V40 505 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PORCNQ9H237 461 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TPD52L2O43399 206 aaKnown RBP11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 SERPINA1P01009 418 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PDHA2P29803 388 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PRKCIP41743 596 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 CTSKP43235 329 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 NBPF12Q5TAG4 269 aaPredicted RBP11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 VWA5B1Q5TIE3 1220 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 FAM151BQ6UXP7 276 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TRPV3Q8NET8 790 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PPM1MQ96MI6 270 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 RACGAP1Q9H0H5 632 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ABHD14A-ACY1A0A1B0GW23 586 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 OTCP00480 354 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 KCNA10Q16322 511 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 EGFLAMQ63HQ2 1017 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 FAM13CQ8NE31 585 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 HDAC10Q969S8 669 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 LENG9Q96B70 501 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TRAF6Q9Y4K3 522 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 IRAK3Q9Y616 596 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TECPR2O15040 1411 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 H0Y858 1186 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 HOXA2O43364 376 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ACSL4O60488 711 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 MTA1Q13330 715 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 ZPBP2Q6X784 338 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 COLGALT2Q8IYK4 626 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 KLHL23Q8NBE8 558 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 PTCD2Q8WV60 388 aaKnown RBP11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TM6SF2Q9BZW4 377 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 TOR3AQ9H497 397 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 RAPGEFL1Q9UHV5 662 aa11.74□□□□□ -0.53
RIMKLA-202ENST00000431473 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms