RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 OTUD4Q01804 1114 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 SEMG2Q02383 582 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 WASHC5Q12768 1159 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 PTK2BQ14289 1009 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 IRF4Q15306 451 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 WSCD2Q2TBF2 565 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 PRAMEF14Q5SWL7 426 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 N4BP2L1Q5TBK1 243 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 PSAPL1Q6NUJ1 521 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 DEFB124Q8NES8 71 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 ACTL9Q8TC94 416 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 SETD7Q8WTS6 366 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 CEP41Q9BYV8 373 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 GLOD4Q9HC38 313 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 PPP2R2CQ9Y2T4 447 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 COQ6Q9Y2Z9 468 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 ACACBO00763 2458 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 ANKRD36A6QL64 1941 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 CABIN1Q9Y6J0 2220 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 A0A0J9YYE9 177 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 SPTY2D1-AS1A0A0U1RR47 76 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 NPIPB15A6NHN6 443 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 A8MX80 341 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 PRLP01236 227 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 TRBC1P01850 177 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 ITGAVP06756 1048 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 ZNF30P17039 623 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 KCNA4P22459 653 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 EPHA8P29322 1005 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 IGFALSP35858 605 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 THOP1P52888 689 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 EIF3EP60228 445 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 ZNF211Q13398 564 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 PDE1CQ14123 709 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 IHHQ14623 411 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 ACOX1Q15067 660 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 CNGA3Q16281 694 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 AADACL2Q6P093 401 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 PARGQ86W56 976 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 CDKL3Q8IVW4 592 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 SLC22A18ASQ8N1D0 253 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 LPCAT1Q8NF37 534 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 TRIM58Q8NG06 486 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 SAP25Q8TEE9 199 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 RBM15Q96T37 977 aaKnown RBP eCLIP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 HERPUD2Q9BSE4 406 aa17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 MBNL1Q9NR56 388 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 KLHL8Q9P2G9 620 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-203ENST00000431127 STK10O94804 968 aaKnown RBP17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 RBP3P10745 1247 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 CTPS1P17812 591 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 HNF1BP35680 557 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 IL9RQ01113 521 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 MTM1Q13496 603 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 RPS6KA1Q15418 735 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 SHBQ15464 509 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 MEI1Q5TIA1 1274 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 PID1Q7Z2X4 250 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 CBARPQ8N350 705 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 RHBDD1Q8TEB9 315 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 TADA1Q96BN2 335 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 COQ10AQ96MF6 247 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 CDC6Q99741 560 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 PCOLCE2Q9UKZ9 415 aa17.41■□□□□ 0.38
CTDSP1-203ENST00000431127 CAPN8A6NHC0 703 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 ANKRD66B4E2M5 251 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 PCCBP05166 539 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 ALPIP09923 528 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 LHCGRP22888 699 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 HTR1BP28222 390 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 RBL1P28749 1068 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 TNNT3P45378 269 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 HNRNPKP61978 463 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 FZD2Q14332 565 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 INPP5AQ14642 412 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 SEL1L2Q5TEA6 688 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 CCDC70Q6NSX1 233 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 RAVER1Q8IY67 606 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 ZNF567Q8N184 647 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 ATL2Q8NHH9 583 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 NUS1Q96E22 293 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 CAMK1GQ96NX5 476 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 LYSMD1Q96S90 227 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 MLPHQ9BV36 600 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 DNAJC28Q9NX36 388 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 FAM153AQ9UHL3 310 aa17.4■□□□□ 0.38
CTDSP1-203ENST00000431127 EPG5Q9HCE0 2579 aa17.39■□□□□ 0.38
CTDSP1-203ENST00000431127 H3BM21 787 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 GIPC1O14908 333 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 CBFA2T3O75081 653 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 CSF2P04141 144 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 PMLP29590 882 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 CD68P34810 354 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 CDK18Q07002 472 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 KLF1Q13351 362 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 TRIP6Q15654 476 aaKnown RBP17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 QPCTQ16769 361 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 LRRC66Q68CR7 880 aa17.39■□□□□ 0.37
CTDSP1-203ENST00000431127 DENND2CQ68D51 928 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms