RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SUPT20HL2P0C7V6 817 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SLC2A3P11169 496 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RHCEP18577 417 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 DDCP20711 480 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 GTF2H1P32780 548 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 MAGEA11P43364 429 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 UGT2B15P54855 530 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 UBE2KP61086 200 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RHDQ02161 417 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 GALNT2Q10471 571 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PAK1Q13153 545 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SLC39A6Q13433 755 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 IL18R1Q13478 541 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ALX1Q15699 326 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 HSDL1Q3SXM5 330 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 C2orf27AQ580R0 203 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 NOMO2Q5JPE7 1267 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 LRRC73Q5JTD7 316 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 TOR1AIP1Q5JTV8 583 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 C9orf152Q5JTZ5 239 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RASGEF1CQ8N431 466 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF561Q8N587 486 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 GRPEL2Q8TAA5 225 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 EGLN2Q96KS0 407 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF578Q96N58 590 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 OPALINQ96PE5 141 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 BTBD9Q96Q07 612 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 NFKBIZQ9BYH8 718 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ARHGAP39Q9C0H5 1083 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 DDX31Q9H8H2 851 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SMURF1Q9HCE7 757 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SYTL2Q9HCH5 934 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RRP7BPQ9NSQ0 103 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 LRRC4BQ9NT99 713 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 C14orf119Q9NWQ9 140 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 NDUFAF4Q9P032 175 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 NUP50Q9UKX7 468 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SLC6A14Q9UN76 642 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 KIAA1024Q9UPX6 916 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 BAIAP2Q9UQB8 552 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PLEKHA6Q9Y2H5 1048 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 KIAA1107Q9UPP5 1409 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 MAPKBP1O60336 1514 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SH3PXD2BA1X283 911 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 WASH4PA8MWX3 477 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 TSPAN3O60637 253 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 KHDRBS3O75525 346 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CYP21A2P08686 494 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 HIBADHP31937 336 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CSKP41240 450 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ACAA2P42765 397 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SLC1A2P43004 574 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SLC1A6P48664 564 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CDR2Q01850 454 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CYP27A1Q02318 531 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PTGDRQ13258 359 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 BTN1A1Q13410 526 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PRKD1Q15139 912 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RFX4Q33E94 735 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 KLHL24Q6TFL4 600 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 AFTPHQ6ULP2 937 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 GDPD3Q7L5L3 318 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CYP2U1Q7Z449 544 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PLEKHM2Q8IWE5 1019 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CENPSQ8N2Z9 138 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF680Q8NEM1 530 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ANGPTL6Q8NI99 470 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PYDC1Q8WXC3 89 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ETNK1Q9HBU6 452 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 FGFR1OP2Q9NVK5 253 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 UPB1Q9UBR1 384 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SALL4Q9UJQ4 1053 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SNX24Q9Y343 169 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SAMHD1Q9Y3Z3 626 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF263O14978 683 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 KDM4BO94953 1096 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SFNP31947 248 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 MDH1P40925 334 aaKnown RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 MAP2K4P45985 399 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ARL4CP56559 192 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RBP5P82980 135 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 HTRA3P83110 453 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 RESTQ13127 1097 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 PON3Q15166 354 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ATP13A5Q4VNC0 1218 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SEZ6Q53EL9 994 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 FSTL4Q6MZW2 842 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 TAF2Q6P1X5 1199 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 VSIG10LQ86VR7 867 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 NKAIN4Q8IVV8 208 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 ETFBKMTQ8IXQ9 262 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CCNYQ8ND76 341 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 DENND6BQ8NEG7 585 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 NAPGQ99747 312 aaPredicted RBP5.38□□□□□ -1.55
PTPN4-203ENST00000430976 MND1Q9BWT6 205 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 SLC4A5Q9BY07 1137 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 OR51B5Q9H339 312 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 DPEP3Q9H4B8 488 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 LATS2Q9NRM7 1088 aa5.38□□□□□ -1.55
PTPN4-203ENST00000430976 CNNM1Q9NRU3 951 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms