RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TNFRSF12AQ9NP84 129 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 GKN1Q9NS71 199 aa13.99□□□□□ -0.17
HOXC4-202ENST00000430889 NLE1Q9NVX2 485 aaPredicted RBP13.99□□□□□ -0.17
HOXC4-202ENST00000430889 POLR3BQ9NW08 1133 aaPredicted RBP13.99□□□□□ -0.17
HOXC4-202ENST00000430889 GOLGA8QA0A0J9YX86 632 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 GOLGA8OA6NCC3 632 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 GOLGA8NF8WBI6 632 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CD3EAPO15446 510 aaKnown RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 INSIG1O15503 277 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 GREM1O60565 184 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CIB2O75838 187 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 VEGFBP49765 207 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 STC1P52823 247 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 C1QTNF8P60827 252 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 MXRA7P84157 204 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SATB1Q01826 763 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ADGRF1Q5T601 910 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ACAD11Q709F0 780 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 TMEM150AQ86TG1 271 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 PIM3Q86V86 326 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 PELI3Q8N2H9 469 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 BBS5Q8N3I7 341 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF689Q96CS4 500 aaPredicted RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 L3HYPDHQ96EM0 354 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SGF29Q96ES7 293 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF333Q96JL9 665 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 LENG8Q96PV6 779 aaPredicted RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CINPQ9BW66 212 aaPredicted RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 GSTO2Q9H4Y5 243 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 TRPM5Q9NZQ8 1165 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CDH22Q9UJ99 828 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CDYLQ9Y232 598 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SSX2IPQ9Y2D8 614 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ARIH1Q9Y4X5 557 aaPredicted RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 C2orf78A6NCI8 922 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 TMEM233B4DJY2 109 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ZMPSTE24O75844 475 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 GLP2RO95838 553 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 RHOCP08134 193 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 RPSAP08865 295 aaKnown RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ELF1P32519 619 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 PPARGP37231 505 aaPredicted RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 VHLP40337 213 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 APLP1P51693 650 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 INHBCP55103 352 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 ARF5P84085 180 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 PEX6Q13608 980 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SETMARQ53H47 684 aaPredicted RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SH2D4BQ5SQS7 431 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 GPR158Q5T848 1215 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 IL31Q6EBC2 164 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 MRNIPQ6NTE8 343 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 KLC3Q6P597 504 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SLC39A5Q6ZMH5 540 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CHSY3Q70JA7 882 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SLC22A9Q8IVM8 553 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CCNYL1Q8N7R7 359 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 OR4L1Q8NH43 312 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 PTERQ96BW5 349 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 CDKN2AIPNLQ96HQ2 116 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 RSRC1Q96IZ7 334 aaKnown RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 TOX2Q96NM4 488 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 DEFB118Q96PH6 123 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 AARSD1Q9BTE6 412 aaKnown RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 TDRD1Q9BXT4 1180 aaKnown RBP13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SHCBP1LQ9BZQ2 653 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 NMRK1Q9NWW6 199 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 TBX21Q9UL17 535 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 MED16Q9Y2X0 877 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 WASF2Q9Y6W5 498 aa13.98□□□□□ -0.17
HOXC4-202ENST00000430889 SCN8AQ9UQD0 1980 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 PTPRSQ13332 1948 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF106Q9H2Y7 1883 aaKnown RBP13.97□□□□□ -0.17
HOXC4-202ENST00000430889 RGSL1A5PLK6 1076 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 NEMP1O14524 444 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 BUD23O43709 281 aaKnown RBP13.97□□□□□ -0.17
HOXC4-202ENST00000430889 LATS1O95835 1130 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 PIRTP0C851 137 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 CD1DP15813 335 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 ATP6V1C1P21283 382 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 CES1P23141 567 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 PPP3CCP48454 512 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 RAB33AQ14088 237 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 TAF1AQ15573 450 aaPredicted RBP13.97□□□□□ -0.17
HOXC4-202ENST00000430889 TMEM198Q66K66 360 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF783Q6ZMS7 281 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 LRRC74BQ6ZQY2 392 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 DEFB128Q7Z7B8 93 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 ADGRG6Q86SQ4 1221 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 MDGA1Q8NFP4 955 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 ADAMTS19Q8TE59 1207 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 STMN2Q93045 179 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 NAF1Q96HR8 494 aaKnown RBP13.97□□□□□ -0.17
HOXC4-202ENST00000430889 FAR2Q96K12 515 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 PPP1R12CQ9BZL4 782 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 MEAF6Q9HAF1 191 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 CATSPERZQ9NTU4 200 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms