RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 ILKQ13418 452 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 ARHGEF7Q14155 803 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 NFATC4Q14934 902 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 ACOX1Q15067 660 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 CNGA3Q16281 694 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 PROX2Q3B8N5 592 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 KAZNQ674X7 775 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 ESRP1Q6NXG1 681 aaKnown RBP9.84□□□□□ -0.83
HDAC6-207ENST00000430858 NPNTQ6UXI9 565 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 SPOCD1Q6ZMY3 1216 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 TMPRSS7Q7RTY8 843 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 TMEM139Q8IV31 216 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 PHACTR4Q8IZ21 702 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 CBARPQ8N350 705 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-207ENST00000430858 GALNT15Q8N3T1 639 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 FAM181AQ8N9Y4 354 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 ZNF548Q8NEK5 533 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-207ENST00000430858 EXD1Q8NHP7 514 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 ARRDC2Q8TBH0 407 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 LRRN4Q8WUT4 740 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 COQ10AQ96MF6 247 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 APOOQ9BUR5 198 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 SLC13A1Q9BZW2 595 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 SPASTQ9UBP0 616 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 APOBEC3BQ9UH17 382 aaKnown RBP9.84□□□□□ -0.83
HDAC6-207ENST00000430858 KLF15Q9UIH9 416 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 SALL4Q9UJQ4 1053 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 DNPEPQ9ULA0 475 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 RPL26L1Q9UNX3 145 aaKnown RBP9.84□□□□□ -0.83
HDAC6-207ENST00000430858 REXO2Q9Y3B8 237 aaKnown RBP9.84□□□□□ -0.83
HDAC6-207ENST00000430858 OR1A2Q9Y585 309 aa9.84□□□□□ -0.83
HDAC6-207ENST00000430858 hCG_1818297A0A087WSY0 165 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 A0A0J9YYE9 177 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 NPIPB15A6NHN6 443 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 K7ESM1 405 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CACNB4O00305 520 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 FFAR2O15552 330 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 PJA2O43164 708 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 RASGRP1O95267 797 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 TRBC1P01850 177 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 ZNF30P17039 623 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 GM2AP17900 193 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 LHCGRP22888 699 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 KELP23276 732 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CTNNA1P35221 906 aaKnown RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 HNF1BP35680 557 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 TRIM23P36406 574 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 HK3P52790 923 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 KIAA1024LP59773 190 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 COPS2P61201 443 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 DAB2P98082 770 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 ZBTB17Q13105 803 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 DNAJC3Q13217 504 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 SMAD1Q15797 465 aaKnown RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 PPP2R5EQ16537 467 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CCDC157Q569K6 752 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 FAXCQ5TGI0 409 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 ZCCHC8Q6NZY4 707 aaKnown RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 PNCKQ6P2M8 343 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 ENPP7Q6UWV6 458 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 DHRS13Q6UX07 377 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 UNQ6494/PRO21346Q6UXR6 183 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CCNI2Q6ZMN8 369 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 KIAA1328Q86T90 577 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 TMPRSS12Q86WS5 348 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CCDC50Q8IVM0 306 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 RAVER1Q8IY67 606 aaKnown RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CNTD1Q8N815 330 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 SPC24Q8NBT2 197 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 PLA2G15Q8NCC3 412 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 ACRBPQ8NEB7 543 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 KIAA1524Q8TCG1 905 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 LMX1AQ8TE12 382 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 KRT35Q92764 455 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 P3H4Q92791 437 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 GATA6Q92908 595 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 NUS1Q96E22 293 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 DTD2Q96FN9 168 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 WDR92Q96MX6 357 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 TMEM121BQ9BXQ6 578 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-207ENST00000430858 LACRTQ9GZZ8 138 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 USP29Q9HBJ7 922 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 PCDH9Q9HC56 1237 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 NCKIPSDQ9NZQ3 722 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CHKBQ9Y259 395 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 PCDHA3Q9Y5H8 950 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 DUSP10Q9Y6W6 482 aa9.83□□□□□ -0.84
HDAC6-207ENST00000430858 CCDC66A2RUB6 948 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 TMEM8BA6NDV4 472 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 CAPN8A6NHC0 703 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 C1QTNF9BB2RNN3 333 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 PDE2AO00408 941 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-207ENST00000430858 MTSS1O43312 755 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 PRLP01236 227 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 PROS1P07225 676 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 MMP2P08253 660 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 ALPIP09923 528 aa9.82□□□□□ -0.84
HDAC6-207ENST00000430858 C1QTNF9P0C862 333 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms