RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 AMACRQ9UHK6 382 aa17.64■□□□□ 0.41
NUP50-208ENST00000430547 SALL4Q9UJQ4 1053 aa17.64■□□□□ 0.41
NUP50-208ENST00000430547 DMXL2Q8TDJ6 3036 aa17.64■□□□□ 0.41
NUP50-208ENST00000430547 ANKRD11Q6UB99 2663 aaPredicted RBP17.63■□□□□ 0.41
NUP50-208ENST00000430547 ACACAQ13085 2346 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 LMO7DNF2Z398 122 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 GCATO75600 419 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 MTA2O94776 668 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 PGLSO95336 258 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 KRT1P04264 644 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 MYF5P13349 255 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 CCNB1P14635 433 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 TSHRP16473 764 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 CES1P23141 567 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 EPHB1P54762 984 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 SRP54P61011 504 aaKnown RBP17.63■□□□□ 0.41
NUP50-208ENST00000430547 INSM1Q01101 510 aaPredicted RBP17.63■□□□□ 0.41
NUP50-208ENST00000430547 GBE1Q04446 702 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 CYP4F3Q08477 520 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 NR0B2Q15466 257 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 CNGA3Q16281 694 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 CDKN3Q16667 212 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 PQLC3Q8N755 202 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 PLA2G15Q8NCC3 412 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 IFI44Q8TCB0 444 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 RAPGEF5Q92565 580 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 TSACCQ96A04 125 aaPredicted RBP17.63■□□□□ 0.41
NUP50-208ENST00000430547 TSGA13Q96PP4 275 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 RNF157Q96PX1 679 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 RBM22Q9NW64 420 aaKnown RBP eCLIP17.63■□□□□ 0.41
NUP50-208ENST00000430547 DKK4Q9UBT3 224 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 PNMA8BQ9ULN7 279 aaPredicted RBP17.63■□□□□ 0.41
NUP50-208ENST00000430547 RAI2Q9Y5P3 530 aa17.63■□□□□ 0.41
NUP50-208ENST00000430547 CPED1A4D0V7 1026 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 SPOPO43791 374 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 HEXIM1O94992 359 aaKnown RBP17.62■□□□□ 0.41
NUP50-208ENST00000430547 TNFP01375 233 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 CAPNS1P04632 268 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 TNNT1P13805 278 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 SLC1A1P43005 524 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 KIAA1024LP59773 190 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 TCEA2Q15560 299 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 ALG11Q2TAA5 492 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 C6orf132Q5T0Z8 1188 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 ESRP1Q6NXG1 681 aaKnown RBP17.62■□□□□ 0.41
NUP50-208ENST00000430547 GKN2Q86XP6 184 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 RHOT1Q8IXI2 618 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 CCDC13Q8IYE1 715 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 TPCN2Q8NHX9 752 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 MAPK15Q8TD08 544 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 MAML1Q92585 1016 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 FATE1Q969F0 183 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 HDAC11Q96DB2 347 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 WDR26Q9H7D7 661 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 LUC7LQ9NQ29 371 aaKnown RBP17.62■□□□□ 0.41
NUP50-208ENST00000430547 DDX56Q9NY93 547 aaKnown RBP17.62■□□□□ 0.41
NUP50-208ENST00000430547 DTLQ9NZJ0 730 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 HEY1Q9Y5J3 304 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 AK5Q9Y6K8 562 aa17.62■□□□□ 0.41
NUP50-208ENST00000430547 ZZEF1O43149 2961 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 LY6G6EA0A0G2JKS1 128 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 GOLGA6CA6NDK9 693 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 GOLGA6BA6NDN3 693 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 PSMD11O00231 422 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 PDE2AO00408 941 aaPredicted RBP17.61■□□□□ 0.41
NUP50-208ENST00000430547 APOL1O14791 398 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 OPA1O60313 960 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 MT-CO3P00414 261 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 GOLGA6DP0CG33 693 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 ZFXP17010 805 aaPredicted RBP17.61■□□□□ 0.41
NUP50-208ENST00000430547 CTPS1P17812 591 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 MAGEA1P43355 309 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 NOP2P46087 812 aaKnown RBP17.61■□□□□ 0.41
NUP50-208ENST00000430547 DSC2Q02487 901 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 LRRC38Q5VT99 294 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 PNCKQ6P2M8 343 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 EFL1Q7Z2Z2 1120 aaKnown RBP17.61■□□□□ 0.41
NUP50-208ENST00000430547 VSIG1Q86XK7 387 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 CACTIN-AS1Q8N1I8 211 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 SDR16C5Q8N3Y7 309 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 OR56A4Q8NGH8 313 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 FUBP1Q96AE4 644 aaKnown RBP17.61■□□□□ 0.41
NUP50-208ENST00000430547 SCRN2Q96FV2 425 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 COQ10AQ96MF6 247 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 DEPDC7Q96QD5 511 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 BOCQ9BWV1 1114 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 GOLGA6AQ9NYA3 693 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 MOSPD1Q9UJG1 213 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 U3KQA8 63 aa17.61■□□□□ 0.41
NUP50-208ENST00000430547 NPIPB15A6NHN6 443 aaPredicted RBP17.6■□□□□ 0.41
NUP50-208ENST00000430547 TAF4O00268 1085 aa17.6■□□□□ 0.41
NUP50-208ENST00000430547 YY2O15391 372 aa17.6■□□□□ 0.41
NUP50-208ENST00000430547 HLA-DQB2P05538 268 aa17.6■□□□□ 0.41
NUP50-208ENST00000430547 CYLC1P35663 651 aaPredicted RBP17.6■□□□□ 0.41
NUP50-208ENST00000430547 SPA17Q15506 151 aa17.6■□□□□ 0.41
NUP50-208ENST00000430547 ALG1LQ6GMV1 187 aa17.6■□□□□ 0.41
NUP50-208ENST00000430547 GUSBP11Q6P575 273 aa17.6■□□□□ 0.41
NUP50-208ENST00000430547 LVRNQ6Q4G3 990 aa17.6■□□□□ 0.41
NUP50-208ENST00000430547 RFX6Q8HWS3 928 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms