RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 SNX27Q96L92 541 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 UXTQ9UBK9 157 aaPredicted RBP13.78□□□□□ -0.2
SGMS1-203ENST00000429490 ZMYM5Q9UJ78 669 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 RIMS3Q9UJD0 308 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 SCAMP3O14828 347 aaKnown RBP13.78□□□□□ -0.2
SGMS1-203ENST00000429490 DPP6P42658 865 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 POLD3Q15054 466 aaPredicted RBP13.78□□□□□ -0.2
SGMS1-203ENST00000429490 OGFOD2Q6N063 350 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 ERI1Q8IV48 349 aaKnown RBP13.78□□□□□ -0.2
SGMS1-203ENST00000429490 CLYBLQ8N0X4 340 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 CDCA5Q96FF9 252 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 C12orf42Q96LP6 360 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 BDH2Q9BUT1 245 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 CASS4Q9NQ75 786 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 ZBTB42B2RXF5 422 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 SOCS2O14508 198 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 HS6ST1O60243 411 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 PAGE1O75459 146 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 SMIM18P0DKX4 95 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 SLC2A3P11169 496 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 ALDH4A1P30038 563 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 BRCC3P46736 316 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 DAOAP59103 153 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 SULT2A1Q06520 285 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 GALNT3Q14435 633 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 ANKS6Q68DC2 871 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 GALNT18Q6P9A2 607 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 SPESP1Q6UW49 350 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 TMEM74Q96NL1 305 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 MROH8Q9H579 483 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 AKTIPQ9H8T0 292 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 SLX4Q8IY92 1834 aa13.78□□□□□ -0.2
SGMS1-203ENST00000429490 CFAP99D6REC4 459 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 PLOD2O00469 737 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 PFDN6O15212 129 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 ZNF182P17025 639 aaPredicted RBP13.77□□□□□ -0.2
SGMS1-203ENST00000429490 MAGP20916 626 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 KCNA5P22460 613 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 PIK3CGP48736 1102 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 IL5RAQ01344 420 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 MERTKQ12866 999 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 ZNF772Q68DY9 489 aaPredicted RBP13.77□□□□□ -0.2
SGMS1-203ENST00000429490 TWIST2Q8WVJ9 160 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 NPY6RQ99463 290 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 MRGBPQ9NV56 204 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 TCAF1Q9Y4C2 921 aa13.77□□□□□ -0.2
SGMS1-203ENST00000429490 RRN3P2A6NIE6 340 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 C16orf96A6NNT2 1141 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 GABBR2O75899 941 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 GSRP00390 522 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 GGT5P36269 586 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 MAGEA3P43357 314 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 MAGEA6P43360 314 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 DSC2Q02487 901 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 TWF1Q12792 350 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 CENPLQ8N0S6 344 aaPredicted RBP13.77□□□□□ -0.21
SGMS1-203ENST00000429490 ITFG1Q8TB96 612 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 SMARCD1Q96GM5 515 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 FAM193BQ96PV7 902 aaPredicted RBP13.77□□□□□ -0.21
SGMS1-203ENST00000429490 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 KCTD3Q9Y597 815 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 IGKV6-21A0A0C4DH24 114 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 CCNA2P20248 432 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 UGT1A1P22309 533 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 UGT1A4P22310 534 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 CD68P34810 354 aaPredicted RBP13.77□□□□□ -0.21
SGMS1-203ENST00000429490 UGT1A3P35503 534 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 UGT1A5P35504 534 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 EGFLAMQ63HQ2 1017 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 TAF2Q6P1X5 1199 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 MICU2Q8IYU8 434 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 METTL6Q8TCB7 284 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 SPPL2BQ8TCT7 592 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 DQX1Q8TE96 717 aaKnown RBP13.77□□□□□ -0.21
SGMS1-203ENST00000429490 LZICQ8WZA0 190 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 MYLPFQ96A32 169 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 ACOX2Q99424 681 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 HGH1Q9BTY7 390 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 FANCEQ9HB96 536 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 LATS2Q9NRM7 1088 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 RBPJLQ9UBG7 517 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 SH3GLB1Q9Y371 365 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 IPPQ9Y573 584 aa13.77□□□□□ -0.21
SGMS1-203ENST00000429490 C1QAP02745 245 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 OR4Q2P0C623 313 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 PSMB9P28065 219 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 RENBPP51606 427 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 RAD23AP54725 363 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
SGMS1-203ENST00000429490 SPIDRQ14159 915 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 C10orf120Q5SQS8 335 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 FAM210AQ96ND0 272 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 PRKD2Q9BZL6 878 aa13.76□□□□□ -0.21
SGMS1-203ENST00000429490 SENP6Q9GZR1 1112 aaPredicted RBP13.76□□□□□ -0.21
SGMS1-203ENST00000429490 BRD8Q9H0E9 1235 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms