RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CHKBQ9Y259 395 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 MST1RQ04912 1400 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 ISM1B1AKI9 464 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 DNTTP04053 509 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 ELFN1P0C7U0 828 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 SLC6A2P23975 617 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 ASMTP46597 345 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 GALNT3Q14435 633 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 SPESP1Q6UW49 350 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 RNF44Q7L0R7 432 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 UBASH3BQ8TF42 649 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 TM6SF2Q9BZW4 377 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 SNX15Q9NRS6 342 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 XPR1Q9UBH6 696 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 CORO1CQ9ULV4 474 aaPredicted RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 FAM237BA0A1B0GVD1 139 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 SUV39H1O43463 412 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 MTRF1O75570 445 aaKnown RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 KRT33AO76009 404 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 GLUD1P00367 558 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 PNLIPRP1P54315 467 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 WNT3AP56704 352 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 TSEN2Q8NCE0 465 aaKnown RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 TTPALQ9BTX7 342 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 DGCR6LQ9BY27 220 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 AASDHPPTQ9NRN7 309 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 TAS2R14Q9NYV8 317 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 IQGAP1P46940 1657 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 A8MX80 341 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 CXCR3P49682 368 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 BCAP31P51572 246 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 CASP5P51878 434 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 TAF5Q15542 800 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 C17orf64Q86WR6 236 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 GJD3Q8N144 294 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 PYDC1Q8WXC3 89 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 LINGO1Q96FE5 620 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 IRAK3Q9Y616 596 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 COL5A2P05997 1499 aaPredicted RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 IRF6O14896 467 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 CST1P01037 141 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 CBX2Q14781 532 aaPredicted RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 RGMBQ6NW40 437 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 TBC1D21Q8IYX1 336 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 AIF1LQ9BQI0 150 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 CDH19Q9H159 772 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
LDB3-205ENST00000429277 ASF1AQ9Y294 204 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 DHRS12A0PJE2 317 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 SLC25A14O95258 325 aaPredicted RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 MC4RP32245 332 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 RPL5P46777 297 aaKnown RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 ARHGAP36Q6ZRI8 547 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 ZNF540Q8NDQ6 660 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 FCRL2Q96LA5 508 aaPredicted RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 ZFYVE1Q9HBF4 777 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 PCDH12Q9NPG4 1184 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 NECTIN3Q9NQS3 549 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 USP20Q9Y2K6 914 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 MOXD2PA6NHM9 499 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 HAT1O14929 419 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 KLHL18O94889 574 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 CAPGP40121 348 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 EIF2B2P49770 351 aaKnown RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 ENPEPQ07075 957 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 DET1Q7L5Y6 550 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 CPA6Q8N4T0 437 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 SAMHD1Q9Y3Z3 626 aaKnown RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 TISP43B9A030 160 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 PRMT5O14744 637 aaPredicted RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 AP5Z1O43299 807 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 OR10H3O60404 316 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 SLC22A3O75751 556 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 CYP3A5P20815 502 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 GLUD2P49448 558 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 MAPK11Q15759 364 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 RGS21Q2M5E4 152 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 LCLAT1Q6UWP7 414 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 FERD3LQ96RJ6 166 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 EXO5Q9H790 373 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 HMGXB4Q9UGU5 601 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 ZNF214Q9UL59 606 aaPredicted RBP12.81□□□□□ -0.36
LDB3-205ENST00000429277 RWDD3Q9Y3V2 267 aa12.81□□□□□ -0.36
LDB3-205ENST00000429277 CCDC162PA2VCL2 907 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 FFAR3O14843 346 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 GPR42O15529 346 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 DNAJA2O60884 412 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 RPP40O75818 363 aaKnown RBP12.8□□□□□ -0.36
LDB3-205ENST00000429277 CDK9P50750 372 aaKnown RBP12.8□□□□□ -0.36
LDB3-205ENST00000429277 LAPTM5Q13571 262 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 DUSP28Q4G0W2 176 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 C9orf57Q5W0N0 161 aa12.8□□□□□ -0.36
LDB3-205ENST00000429277 OR52E6Q96RD3 313 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms