RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ASS1P00966 412 aaKnown RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 CTRB1P17538 263 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 CSRP3P50461 194 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 PITRM1Q5JRX3 1037 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 CTRB2Q6GPI1 263 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 NIPA1Q7RTP0 329 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 PODNQ7Z5L7 613 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 SIAH1Q8IUQ4 282 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 GALNT12Q8IXK2 581 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 MCRS1Q96EZ8 462 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 QKIQ96PU8 341 aaKnown RBP eCLIP16.14■□□□□ 0.178e-7■■■■□ 23.3
C9orf3-206ENST00000428313 VPS35Q96QK1 796 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 B3GNT4Q9C0J1 378 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 MEAF6Q9HAF1 191 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 CISHQ9NSE2 258 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 SEPT9Q9UHD8 586 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-206ENST00000428313 CYTH4Q9UIA0 394 aa16.14■□□□□ 0.17
C9orf3-206ENST00000428313 QSER1Q2KHR3 1735 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 ZW10O43264 779 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 INMTO95050 263 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 MYCP01106 439 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF135P52742 658 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 SESN2P58004 480 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 CCNJQ5T5M9 372 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 TMEM236Q5W0B7 351 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 TTC23Q5W5X9 447 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 MINDY1Q8N5J2 469 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 KIAA1958Q8N8K9 716 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 CHDHQ8NE62 594 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 PCDH19Q8TAB3 1148 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 SGCDQ92629 289 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 PROX1Q92786 737 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 AURKBQ96GD4 344 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 CNPY3Q9BT09 278 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 BDH2Q9BUT1 245 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 C1QTNF1Q9BXJ1 281 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 MKRN2Q9H000 416 aaKnown RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 C2orf40Q9H1Z8 148 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 DDX28Q9NUL7 540 aaKnown RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 GIMAP4Q9NUV9 329 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 ANAPC2Q9UJX6 822 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 PRR12Q9ULL5 1215 aa16.13■□□□□ 0.17
C9orf3-206ENST00000428313 ARIH1Q9Y4X5 557 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-206ENST00000428313 TCRBV5S2A0A599 114 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ERVH48-1M5A8F1 160 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 AP3B1O00203 1094 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 HPRP00739 348 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 THRBP10828 461 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 DDOSTP39656 456 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 CYP51A1Q16850 503 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 CCBE1Q6UXH8 406 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-206ENST00000428313 PAGE2Q7Z2X7 111 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 TOR1AIP2Q8NFQ8 470 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 YIPF6Q96EC8 236 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 CEP170P1Q96L14 293 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF300Q96RE9 604 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-206ENST00000428313 NODALQ96S42 347 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 KCTD14Q9BQ13 255 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ASPSCR1Q9BZE9 553 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 TM9SF3Q9HD45 589 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ACSS2Q9NR19 701 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 CHRAC1Q9NRG0 131 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 KCNH7Q9NS40 1196 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ADPRHL2Q9NX46 363 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 SYBUQ9NX95 663 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 FBXO5Q9UKT4 447 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 TMEM233B4DJY2 109 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 TARM1B6A8C7 271 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 HAT1O14929 419 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 MED7O43513 233 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 TMCC2O75069 709 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 MSL3P1P0C860 447 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 IL7RP16871 459 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 NAGAP17050 411 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ITGB5P18084 799 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ACVR2AP27037 513 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 S100A5P33763 92 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 CD68P34810 354 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ARSFP54793 590 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 SPP2Q13103 211 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 DAG1Q14118 895 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 NFIXQ14938 502 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 TAS1R3Q7RTX0 852 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 FAM109AQ8N4B1 249 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 ZNF670Q9BS34 389 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 NIF3L1Q9GZT8 377 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 CAB39LQ9H9S4 337 aa16.12■□□□□ 0.17
C9orf3-206ENST00000428313 RAVER2Q9HCJ3 691 aaKnown RBP16.12■□□□□ 0.17
C9orf3-206ENST00000428313 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-206ENST00000428313 STRCQ7RTU9 1775 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 PDZK1P1A8MUH7 402 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 SHOXO15266 292 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 GPD1P21695 349 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 ACOT2P49753 483 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 EPS8Q12929 822 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 PRPSAP1Q14558 356 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 UGCGQ16739 394 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 TBPL2Q6SJ96 375 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 CLYBLQ8N0X4 340 aa16.11■□□□□ 0.17
C9orf3-206ENST00000428313 OR5B17Q8NGF7 314 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms