RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ECHDC3Q96DC8 303 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 CHFRQ96EP1 664 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 CDKN2AIPNLQ96HQ2 116 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 KLHL32Q96NJ5 620 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 SMIM14Q96QK8 99 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 PHF7Q9BWX1 381 aaPredicted RBP15.15■□□□□ 0.02
GINS3-203ENST00000426538 OSBPL1AQ9BXW6 950 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 MFSD1Q9H3U5 465 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 KCNK12Q9HB15 430 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 PKP3Q9Y446 797 aa15.15■□□□□ 0.02
GINS3-203ENST00000426538 ITGA2BP08514 1039 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 KRT4P19013 534 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 NFKBIAP25963 317 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 HNF1BP35680 557 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 SOX9P48436 509 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 GALK1P51570 392 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 CSE1LP55060 971 aaKnown RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 DNAJC3Q13217 504 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 PTPRCAPQ14761 206 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 HNRNPA1L2Q32P51 320 aaKnown RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 ZNF470Q6ECI4 717 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 BRAT1Q6PJG6 821 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 USP45Q70EL2 814 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 SUGP1Q8IWZ8 645 aaKnown RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 LMNTD2Q8IXW0 634 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 C4orf33Q8N1A6 199 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 MZB1Q8WU39 189 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 SCRN2Q96FV2 425 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 RBBP8Q99708 897 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 P2RY13Q9BPV8 354 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 MTG2Q9H4K7 406 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 ZFYVE1Q9HBF4 777 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 SUN2Q9UH99 717 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 ZNF711Q9Y462 761 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 C1orf232A0A0U1RR37 186 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 CCL22O00626 93 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 RRP9O43818 475 aaKnown RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 SIN3BO75182 1162 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 CREB1P16220 341 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 HMGCLP35914 325 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 ARSDP51689 593 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 ZNF140P52738 457 aaPredicted RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 CTBP1Q13363 440 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 BMPR2Q13873 1038 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 GPR153Q6NV75 609 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 KIAA0408Q6ZU52 694 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 DENND6AQ8IWF6 608 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 SFTPA1Q8IWL2 248 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 SLC44A3Q8N4M1 653 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 OR4L1Q8NH43 312 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 ALKBH8Q96BT7 664 aaKnown RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 SUDS3Q9H7L9 328 aaPredicted RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 BPIFA1Q9NP55 256 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 TRPV5Q9NQA5 729 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 THAP10Q9P2Z0 257 aaPredicted RBP15.14■□□□□ 0.01
GINS3-203ENST00000426538 PPIL1Q9Y3C6 166 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 STARD13Q9Y3M8 1113 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 WASF2Q9Y6W5 498 aa15.14■□□□□ 0.01
GINS3-203ENST00000426538 TMEM120BA0PK00 339 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 CAPN8A6NHC0 703 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 A6NNZ2 444 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 GOLGA8RI6L899 631 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 GOT2P00505 430 aaKnown RBP15.13■□□□□ 0.01
GINS3-203ENST00000426538 AHSGP02765 367 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 PRNPP04156 253 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 HLA-EP13747 358 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 PPARDQ03181 441 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 PTPRRQ15256 657 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 TUBB8Q3ZCM7 444 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 MRNIPQ6NTE8 343 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 LYSMD3Q7Z3D4 306 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 SDCCAG8Q86SQ7 713 aaPredicted RBP15.13■□□□□ 0.01
GINS3-203ENST00000426538 ZSWIM9Q86XI8 627 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 C2CD4AQ8NCU7 369 aaPredicted RBP15.13■□□□□ 0.01
GINS3-203ENST00000426538 HCAR2Q8TDS4 363 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 OR8D1Q8WZ84 308 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 VOPP1Q96AW1 172 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 ATXN7L3BQ96GX2 97 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 TMEM245Q9H330 911 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 FBRSL1Q9HCM7 1045 aaKnown RBP15.13■□□□□ 0.01
GINS3-203ENST00000426538 GGT7Q9UJ14 662 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 FBXO5Q9UKT4 447 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 SMG5Q9UPR3 1016 aaKnown RBP15.13■□□□□ 0.01
GINS3-203ENST00000426538 EYSQ5T1H1 3165 aa15.13■□□□□ 0.01
GINS3-203ENST00000426538 KIAA1549LQ6ZVL6 1849 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 CCDC162PA2VCL2 907 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 NPC1O15118 1278 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 CD3EAPO15446 510 aaKnown RBP15.12■□□□□ 0.01
GINS3-203ENST00000426538 SPAG7O75391 227 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 PYGBP11216 843 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 XPAP23025 273 aaPredicted RBP15.12■□□□□ 0.01
GINS3-203ENST00000426538 SLC1A2P43004 574 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 TNFRSF4P43489 277 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 LIMK2P53671 638 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 ELAVL3Q14576 367 aaKnown RBP15.12■□□□□ 0.01
GINS3-203ENST00000426538 FASTKD1Q53R41 847 aaKnown RBP15.12■□□□□ 0.01
GINS3-203ENST00000426538 ZNF805Q5CZA5 627 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 C9orf64Q5T6V5 341 aa15.12■□□□□ 0.01
GINS3-203ENST00000426538 FSTL4Q6MZW2 842 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms