RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZMYM5Q9UJ78 669 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 FBXW11Q9UKB1 542 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 ENPP3O14638 875 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 CASQ2O14958 399 aaPredicted RBP13.42□□□□□ -0.26
USP42-203ENST00000426246 NFKBIAP25963 317 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 HOXD10P28358 340 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 PKN3Q6P5Z2 889 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
USP42-203ENST00000426246 APOL5Q9BWW9 433 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 MID2Q9UJV3 735 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 A0A1W2PQ67 120 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 A0A1W2PQH9 124 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 RHOBTB1O94844 696 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 ZBTB11O95625 1053 aaPredicted RBP13.42□□□□□ -0.26
USP42-203ENST00000426246 ARSDP51689 593 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 TSPY1Q01534 308 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 TAF12Q16514 161 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 CYP51A1Q16850 503 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 KLHDC10Q6PID8 442 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 C4orf22Q6V702 233 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 RNF180Q86T96 592 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 ZMIZ2Q8NF64 920 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 RAET1EQ8TD07 263 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 EZH1Q92800 747 aaPredicted RBP13.42□□□□□ -0.26
USP42-203ENST00000426246 MTFMTQ96DP5 389 aaKnown RBP13.42□□□□□ -0.26
USP42-203ENST00000426246 TMEM74Q96NL1 305 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 GLOD4Q9HC38 313 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 BCAP29Q9UHQ4 241 aa13.42□□□□□ -0.26
USP42-203ENST00000426246 ARL5CA6NH57 179 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 ZNF623O75123 536 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 HGFP14210 728 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 RPL34P49207 117 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 CREB5Q02930 508 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 PPIDQ08752 370 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 PCID2Q5JVF3 399 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 MARC1Q5VT66 337 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 CRYBG2Q8N1P7 616 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 CBR4Q8N4T8 237 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 RTP4Q96DX8 246 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 HNRNPABQ99729 332 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 SEMA3CQ99985 751 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 ARMC7Q9H6L4 198 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 CROTQ9UKG9 612 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 RPL26L1Q9UNX3 145 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 U3KQV3 271 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 GNGT2O14610 69 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 DCLK1O15075 740 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 GPR182O15218 404 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 CABYRO75952 493 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 GNAO1P09471 354 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 HAPLN1P10915 354 aaPredicted RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 PNPLA4P41247 253 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 TWF1Q12792 350 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 UGP2Q16851 508 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 TIGD2Q4W5G0 525 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 AGAP9Q5VTM2 703 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 FAM117BQ6P1L5 589 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 C16orf59Q7L2K0 433 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 DHFR2Q86XF0 187 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 MFSD6LQ8IWD5 586 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 TSPAN14Q8NG11 270 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 ZFP28Q8NHY6 868 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 ADAM2Q99965 735 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 GALNT8Q9NY28 637 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 USP22Q9UPT9 525 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 AAR2Q9Y312 384 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 TRAF6Q9Y4K3 522 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 A0A1W2PQ45 241 aaPredicted RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 A0A1W2PQY0 241 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 PLOD2O00469 737 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 CCNT2O60583 730 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 MLNP12872 115 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 PCSK6P29122 969 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 RABL3Q5HYI8 236 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 OTUD1Q5VV17 481 aaPredicted RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 ZYG11AQ6WRX3 759 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 HSPBAP1Q96EW2 488 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 RNF145Q96MT1 663 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 TSEN34Q9BSV6 310 aaKnown RBP13.41□□□□□ -0.26
USP42-203ENST00000426246 EFHD1Q9BUP0 239 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 EXD2Q9NVH0 621 aa13.41□□□□□ -0.26
USP42-203ENST00000426246 SLC12A8A0AV02 714 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 PRORSD1PA6NEY8 169 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 GABRDO14764 452 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 FFAR3O14843 346 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 GPR42O15529 346 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 GLUD2P49448 558 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 HARS2P49590 506 aaKnown RBP13.4□□□□□ -0.26
USP42-203ENST00000426246 LSM3P62310 102 aaKnown RBP13.4□□□□□ -0.26
USP42-203ENST00000426246 GSTA3Q16772 222 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 ZRANB3Q5FWF4 1079 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 LRRTM3Q86VH5 581 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 FAM193BQ96PV7 902 aaPredicted RBP13.4□□□□□ -0.26
USP42-203ENST00000426246 TRAPPC9Q96Q05 1148 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 DRC3Q9H069 523 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms