RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 SLC8A1P32418 973 aa15.08■□□□□ 0
CALD1-206ENST00000424922 CCDC85BQ15834 202 aaPredicted RBP15.08■□□□□ 0
CALD1-206ENST00000424922 ACCSLQ4AC99 568 aa15.08■□□□□ 0
CALD1-206ENST00000424922 PCID2Q5JVF3 399 aa15.08■□□□□ 0
CALD1-206ENST00000424922 CYB5D2Q8WUJ1 264 aa15.08■□□□□ 0
CALD1-206ENST00000424922 CDKL2Q92772 493 aa15.08■□□□□ 0
CALD1-206ENST00000424922 ZNF669Q96BR6 464 aaPredicted RBP15.08■□□□□ 0
CALD1-206ENST00000424922 MFSD3Q96ES6 412 aa15.08■□□□□ 0
CALD1-206ENST00000424922 TMEM237Q96Q45 408 aa15.08■□□□□ 0
CALD1-206ENST00000424922 RAB3IPQ96QF0 476 aaPredicted RBP15.08■□□□□ 0
CALD1-206ENST00000424922 TRIB3Q96RU7 358 aa15.08■□□□□ 0
CALD1-206ENST00000424922 TDRD1Q9BXT4 1180 aaKnown RBP15.08■□□□□ 0
CALD1-206ENST00000424922 NPHS2Q9NP85 383 aa15.08■□□□□ 0
CALD1-206ENST00000424922 RAI2Q9Y5P3 530 aa15.08■□□□□ 0
CALD1-206ENST00000424922 BIRC5O15392 142 aa15.07■□□□□ 0
CALD1-206ENST00000424922 UGT1A9O60656 530 aa15.07■□□□□ 0
CALD1-206ENST00000424922 EPOP01588 193 aa15.07■□□□□ 0
CALD1-206ENST00000424922 GDI1P31150 447 aa15.07■□□□□ 0
CALD1-206ENST00000424922 MESP2Q0VG99 397 aa15.07■□□□□ 0
CALD1-206ENST00000424922 RUNX3Q13761 415 aa15.07■□□□□ 0
CALD1-206ENST00000424922 SEPT6Q14141 434 aa15.07■□□□□ 0
CALD1-206ENST00000424922 FRG1Q14331 258 aaKnown RBP15.07■□□□□ 0
CALD1-206ENST00000424922 SMAD1Q15797 465 aaKnown RBP15.07■□□□□ 0
CALD1-206ENST00000424922 ANKRD20A4Q4UJ75 823 aa15.07■□□□□ 0
CALD1-206ENST00000424922 TMEM135Q86UB9 458 aa15.07■□□□□ 0
CALD1-206ENST00000424922 CPA6Q8N4T0 437 aa15.07■□□□□ 0
CALD1-206ENST00000424922 PPHLN1Q8NEY8 458 aaKnown RBP15.07■□□□□ 0
CALD1-206ENST00000424922 PDCD6IPQ8WUM4 868 aaKnown RBP15.07■□□□□ 0
CALD1-206ENST00000424922 SUSD6Q92537 303 aa15.07■□□□□ 0
CALD1-206ENST00000424922 ZNF778Q96MU6 729 aa15.07■□□□□ 0
CALD1-206ENST00000424922 KIFC1Q9BW19 673 aa15.07■□□□□ 0
CALD1-206ENST00000424922 CIPCQ9C0C6 399 aa15.07■□□□□ 0
CALD1-206ENST00000424922 UGT1A7Q9HAW7 530 aa15.07■□□□□ 0
CALD1-206ENST00000424922 UGT1A10Q9HAW8 530 aa15.07■□□□□ 0
CALD1-206ENST00000424922 UGT1A8Q9HAW9 530 aa15.07■□□□□ 0
CALD1-206ENST00000424922 IL1RAPL1Q9NZN1 696 aa15.07■□□□□ 0
CALD1-206ENST00000424922 EVLQ9UI08 416 aaPredicted RBP15.07■□□□□ 0
CALD1-206ENST00000424922 ERVW-1Q9UQF0 538 aa15.07■□□□□ 0
CALD1-206ENST00000424922 MTO1Q9Y2Z2 717 aaKnown RBP15.07■□□□□ 0
CALD1-206ENST00000424922 ATG2BQ96BY7 2078 aa15.07■□□□□ 0
CALD1-206ENST00000424922 HMX2A2RU54 273 aa15.07■□□□□ 0
CALD1-206ENST00000424922 TRAFD1O14545 582 aaPredicted RBP15.07■□□□□ 0
CALD1-206ENST00000424922 BNIP3LO60238 219 aa15.07■□□□□ 0
CALD1-206ENST00000424922 ECI2O75521 394 aa15.07■□□□□ 0
CALD1-206ENST00000424922 USP1O94782 785 aa15.07■□□□□ 0
CALD1-206ENST00000424922 NDST3O95803 873 aa15.07■□□□□ 0
CALD1-206ENST00000424922 FGF1P05230 155 aa15.07■□□□□ 0
CALD1-206ENST00000424922 PDHA1P08559 390 aa15.07■□□□□ 0
CALD1-206ENST00000424922 NEFHP12036 1026 aa15.07■□□□□ 0
CALD1-206ENST00000424922 HLA-DPA1P20036 260 aa15.07■□□□□ 0
CALD1-206ENST00000424922 NMBRP28336 390 aa15.07■□□□□ 0
CALD1-206ENST00000424922 RASSF2P50749 326 aa15.07■□□□□ 0
CALD1-206ENST00000424922 TRAF2Q12933 501 aa15.07■□□□□ 0
CALD1-206ENST00000424922 DLG2Q15700 870 aa15.07■□□□□ 0
CALD1-206ENST00000424922 RALGPS1Q5JS13 557 aa15.07■□□□□ 0
CALD1-206ENST00000424922 SPANXN3Q5MJ09 141 aa15.07■□□□□ 0
CALD1-206ENST00000424922 C22orf39Q6P5X5 142 aa15.07■□□□□ 0
CALD1-206ENST00000424922 PKN3Q6P5Z2 889 aa15.07■□□□□ 0
CALD1-206ENST00000424922 CDHR3Q6ZTQ4 885 aa15.07■□□□□ 0
CALD1-206ENST00000424922 RYBPQ8N488 228 aaPredicted RBP15.07■□□□□ 0
CALD1-206ENST00000424922 RMDN1Q96DB5 314 aa15.07■□□□□ 0
CALD1-206ENST00000424922 THOC1Q96FV9 657 aaKnown RBP15.07■□□□□ 0
CALD1-206ENST00000424922 C7orf26Q96N11 449 aa15.07■□□□□ 0
CALD1-206ENST00000424922 TUBB6Q9BUF5 446 aa15.07■□□□□ 0
CALD1-206ENST00000424922 TRMT61BQ9BVS5 477 aaKnown RBP15.07■□□□□ 0
CALD1-206ENST00000424922 SIRPGQ9P1W8 387 aa15.07■□□□□ 0
CALD1-206ENST00000424922 DEC1Q9P2X7 70 aa15.07■□□□□ 0
CALD1-206ENST00000424922 SLC27A6Q9Y2P4 619 aa15.07■□□□□ 0
CALD1-206ENST00000424922 DNAJC6O75061 913 aa15.06■□□□□ 0
CALD1-206ENST00000424922 IGSF6O95976 241 aa15.06■□□□□ 0
CALD1-206ENST00000424922 PRLP01236 227 aa15.06■□□□□ 0
CALD1-206ENST00000424922 BGNP21810 368 aa15.06■□□□□ 0
CALD1-206ENST00000424922 GKP32189 559 aa15.06■□□□□ 0
CALD1-206ENST00000424922 AP1S1P61966 158 aa15.06■□□□□ 0
CALD1-206ENST00000424922 SNRPD1P62314 119 aaKnown RBP15.06■□□□□ 0
CALD1-206ENST00000424922 KDSRQ06136 332 aa15.06■□□□□ 0
CALD1-206ENST00000424922 MSLNQ13421 630 aaPredicted RBP15.06■□□□□ 0
CALD1-206ENST00000424922 ATG16L1Q676U5 607 aa15.06■□□□□ 0
CALD1-206ENST00000424922 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.06■□□□□ 0
CALD1-206ENST00000424922 OR2AP1Q8NGE2 309 aa15.06■□□□□ 0
CALD1-206ENST00000424922 TCAF1Q9Y4C2 921 aa15.06■□□□□ 0
CALD1-206ENST00000424922 ARIH1Q9Y4X5 557 aaPredicted RBP15.06■□□□□ 0
CALD1-206ENST00000424922 NUMBLQ9Y6R0 609 aa15.06■□□□□ 0
CALD1-206ENST00000424922 TCF20Q9UGU0 1960 aaKnown RBP15.06■□□□□ 0
CALD1-206ENST00000424922 ZCWPW2A0A1B0GU75 182 aa15.05■□□□□ 0
CALD1-206ENST00000424922 PRKCGP05129 697 aa15.05■□□□□ 0
CALD1-206ENST00000424922 KRT16P08779 473 aa15.05■□□□□ 0
CALD1-206ENST00000424922 PIRTP0C851 137 aa15.05■□□□□ 0
CALD1-206ENST00000424922 KCNA5P22460 613 aa15.05■□□□□ 0
CALD1-206ENST00000424922 CSNK1DP48730 415 aa15.05■□□□□ 0
CALD1-206ENST00000424922 BMPR2Q13873 1038 aa15.05■□□□□ 0
CALD1-206ENST00000424922 NAIF1Q69YI7 327 aaPredicted RBP15.05■□□□□ 0
CALD1-206ENST00000424922 GRAMD4Q6IC98 578 aa15.05■□□□□ 0
CALD1-206ENST00000424922 KYAT3Q6YP21 454 aaKnown RBP15.05■□□□□ 0
CALD1-206ENST00000424922 MTSS1LQ765P7 747 aa15.05■□□□□ 0
CALD1-206ENST00000424922 CAMK1DQ8IU85 385 aa15.05■□□□□ 0
CALD1-206ENST00000424922 LPCAT1Q8NF37 534 aa15.05■□□□□ 0
CALD1-206ENST00000424922 RFWD2Q8NHY2 731 aa15.05■□□□□ 0
CALD1-206ENST00000424922 WFIKKN2Q8TEU8 576 aa15.05■□□□□ 0
CALD1-206ENST00000424922 ISG20Q96AZ6 181 aaKnown RBP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms