RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PFN3P60673 137 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 RPL26P61254 145 aaKnown RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 RALGDSQ12967 914 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 BNIP3Q12983 259 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 FZD2Q14332 565 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 AGERQ15109 404 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 LLGL1Q15334 1064 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 SHBQ15464 509 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 TAZQ16635 292 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 DENND2CQ68D51 928 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 LIPIQ6XZB0 460 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 PEX26Q7Z412 305 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 SLC22A18ASQ8N1D0 253 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 EID2Q8N6I1 236 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 TP53I13Q8NBR0 393 aaPredicted RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 BAHD1Q8TBE0 780 aaPredicted RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 BTN2A2Q8WVV5 523 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 KRT35Q92764 455 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 CNDP2Q96KP4 475 aaKnown RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 IL12RB2Q99665 862 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 TDRD1Q9BXT4 1180 aaKnown RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 MBNL1Q9NR56 388 aaKnown RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 GPR27Q9NS67 375 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 DNPEPQ9ULA0 475 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 RPL26L1Q9UNX3 145 aaKnown RBP10.98□□□□□ -0.65
USP49-204ENST00000423567 PCDHA3Q9Y5H8 950 aa10.98□□□□□ -0.65
USP49-204ENST00000423567 DCHS1Q96JQ0 3298 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 CNOT1A5YKK6 2376 aaKnown RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 LAMA1P25391 3075 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 GOLGA8CPA6NN73 597 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 MIF4GDA9UHW6 222 aaKnown RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 PSMD11O00231 422 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 CACNB4O00305 520 aaPredicted RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 HEXIM1O94992 359 aaKnown RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 LDOC1O95751 146 aaPredicted RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 CSF2P04141 144 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 NME1P15531 152 aaKnown RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 JUNDP17535 347 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 CTPS1P17812 591 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 CD86P42081 329 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 TNNT3P45378 269 aaPredicted RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 BLKP51451 505 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 ZBTB17Q13105 803 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 MTM1Q13496 603 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 CNGA3Q16281 694 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 WSCD2Q2TBF2 565 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 ZNF542PQ5EBM4 170 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 CCDC70Q6NSX1 233 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 MACC1Q6ZN28 852 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 BBS12Q6ZW61 710 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 NT5DC3Q86UY8 548 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 ZC3H18Q86VM9 953 aaKnown RBP10.97□□□□□ -0.65
USP49-204ENST00000423567 LPCAT1Q8NF37 534 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 ARRDC2Q8TBH0 407 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 PIH1D2Q8WWB5 315 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 NUS1Q96E22 293 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 SCRN2Q96FV2 425 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 NSMCE3Q96MG7 304 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 AGAP3Q96P47 875 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 HEMGNQ9BXL5 484 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 ADGRE3Q9BY15 652 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 CEP41Q9BYV8 373 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 SLC13A1Q9BZW2 595 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 PCDH9Q9HC56 1237 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 EVA1BQ9NVM1 165 aa10.97□□□□□ -0.65
USP49-204ENST00000423567 TRPM6Q9BX84 2022 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 A0A0J9YYE9 177 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 GRID2IPA4D2P6 1211 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 GOLGA6L9A6NEM1 432 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 NPIPB15A6NHN6 443 aaPredicted RBP10.96□□□□□ -0.65
USP49-204ENST00000423567 HACD1B0YJ81 288 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 APOC4-APOC2K7ER74 178 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 PDE2AO00408 941 aaPredicted RBP10.96□□□□□ -0.65
USP49-204ENST00000423567 ENC1O14682 589 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 FFAR2O15552 330 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 KRT86O43790 486 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 FZD6O60353 706 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 PIAS2O75928 621 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 TRBC1P01850 177 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 APOC2P02655 101 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 PDHA1P08559 390 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 CDK4P11802 303 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 PECAM1P16284 738 aaPredicted RBP10.96□□□□□ -0.65
USP49-204ENST00000423567 ZNF30P17039 623 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 KELP23276 732 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 DGKAP23743 735 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 HNF1BP35680 557 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 SHC2P98077 582 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 PPARDQ03181 441 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 NIPAL4Q0D2K0 466 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 INPP5AQ14642 412 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 NFATC4Q14934 902 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 PRKD1Q15139 912 aaPredicted RBP10.96□□□□□ -0.65
USP49-204ENST00000423567 TEX44Q53QW1 395 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 CCDC157Q569K6 752 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 FAXCQ5TGI0 409 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 RNF10Q8N5U6 811 aaKnown RBP10.96□□□□□ -0.65
USP49-204ENST00000423567 LRRC57Q8N9N7 239 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 HAUS1Q96CS2 278 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 MCCC1Q96RQ3 725 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms