RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 WDR45BQ5MNZ6 344 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 LAIR1Q6GTX8 287 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 KIAA1161Q6NSJ0 714 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 CCDC70Q6NSX1 233 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 CCDC137Q6PK04 289 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 TSPAN33Q86UF1 283 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 TRIM69Q86WT6 500 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 KLHL7Q8IXQ5 586 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 NDUFAF2Q8N183 169 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 C12orf50Q8NA57 414 aaPredicted RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 DNASE2BQ8WZ79 361 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 PIGKQ92643 395 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 SCRN2Q96FV2 425 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 LOXL4Q96JB6 756 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 APOL2Q9BQE5 337 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ORAI3Q9BRQ5 295 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 FICDQ9BVA6 458 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ADGRE3Q9BY15 652 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 DDX47Q9H0S4 455 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ARRDC1-AS1Q9H2J1 176 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ETNK1Q9HBU6 452 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 TMEM74BQ9NUR3 256 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 RPL26L1Q9UNX3 145 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 PPIL1Q9Y3C6 166 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 SLCO1B1Q9Y6L6 691 aa9.31□□□□□ -0.92
PDGFC-202ENST00000422544 ATXN2Q99700 1313 aaKnown RBP9.31□□□□□ -0.92
PDGFC-202ENST00000422544 A0A1W2PPC4 97 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 NPIPB15A6NHN6 443 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 KIF2AO00139 706 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 WNT9AO14904 365 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 LATO43561 262 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 LZTS3O60299 673 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 USP12O75317 370 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 TM7SF2O76062 418 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 EPOP01588 193 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 KRT14P02533 472 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 TUBB4AP04350 444 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 ATXN1LP0C7T5 689 aaKnown RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 PIRTP0C851 137 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 CYP2A6P11509 494 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 C6P13671 934 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 LHCGRP22888 699 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 NFKBIAP25963 317 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 CD27P26842 260 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 VIPR1P32241 457 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 ADRA1AP35348 466 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 TNNT3P45378 269 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 GRIA4P48058 902 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 FNTAP49354 379 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 VPS41P49754 854 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 LMNB2Q03252 620 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 SGCGQ13326 291 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 PUM1Q14671 1186 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 SLC1A5Q15758 541 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 CCDC6Q16204 474 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 SIRPB2Q5JXA9 342 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 DENND2CQ68D51 928 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 CRTC1Q6UUV9 634 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 RANBP10Q6VN20 620 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 LIPIQ6XZB0 460 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 USP45Q70EL2 814 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 DPPA4Q7L190 304 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 CYP2U1Q7Z449 544 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 SYT12Q8IV01 421 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 PDCD7Q8N8D1 485 aaKnown RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 MCCC1Q96RQ3 725 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-202ENST00000422544 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 FSD1LQ9BXM9 530 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 SLC17A9Q9BYT1 436 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 RAB6BQ9NRW1 208 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 PAK5Q9P286 719 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 PILRBQ9UKJ0 227 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 CA5BQ9Y2D0 317 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 COQ6Q9Y2Z9 468 aa9.3□□□□□ -0.92
PDGFC-202ENST00000422544 SPAG17Q6Q759 2223 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 GOLGA6CA6NDK9 693 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 GOLGA6BA6NDN3 693 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 CAPN8A6NHC0 703 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 E7EVH7 732 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 RAD51BO15315 384 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 HEXIM1O94992 359 aaKnown RBP9.29□□□□□ -0.92
PDGFC-202ENST00000422544 EPN2O95208 641 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 CLDN7O95471 211 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 RETP07949 1114 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 ELFN1P0C7U0 828 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 GOLGA6DP0CG33 693 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 DEKP35659 375 aaKnown RBP9.29□□□□□ -0.92
PDGFC-202ENST00000422544 FDFT1P37268 417 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 PTGIRP43119 386 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 LMAN1P49257 510 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 TERF1P54274 439 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 PTSQ03393 145 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 GPS1Q13098 491 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 ARHGEF7Q14155 803 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 ACOX1Q15067 660 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 CNGA3Q16281 694 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 CDKN3Q16667 212 aa9.29□□□□□ -0.92
PDGFC-202ENST00000422544 RSPO4Q2I0M5 234 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms