RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 STPG1Q5TH74 334 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 Q6ZSR6 202 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 TSPAN33Q86UF1 283 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 MINDY1Q8N5J2 469 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 TMEM145Q8NBT3 493 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 IPMKQ8NFU5 416 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 SPOCK2Q92563 424 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 MS4A14Q96JA4 679 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 SPATA13Q96N96 652 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 SMIM14Q96QK8 99 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 FSD1LQ9BXM9 530 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 GBA3Q9H227 469 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 GDF3Q9NR23 364 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 PPIL1Q9Y3C6 166 aa15.8■□□□□ 0.12
BRAT1-202ENST00000421712 A0A0U1RQS6 177 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 GOLGA6CA6NDK9 693 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 GOLGA6BA6NDN3 693 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 POM121BA6NF01 834 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 C5orf60A6NFR6 353 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 A6NNZ2 444 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 OPHN1O60890 802 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 ANXA9O76027 345 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 RECQL5O94762 991 aaPredicted RBP15.79■□□□□ 0.12
BRAT1-202ENST00000421712 HEXIM1O94992 359 aaKnown RBP15.79■□□□□ 0.12
BRAT1-202ENST00000421712 NDST3O95803 873 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 CER1O95813 267 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 IFNB1P01574 187 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 PCCBP05166 539 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 GOLGA6DP0CG33 693 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 PSMB4P28070 264 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 STIP1P31948 543 aaKnown RBP15.79■□□□□ 0.12
BRAT1-202ENST00000421712 OVGP1Q12889 678 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 MPP3Q13368 585 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 SLC14A2Q15849 920 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 CNGA3Q16281 694 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 CCNG2Q16589 344 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 QPCTQ16769 361 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 PRAMEF14Q5SWL7 426 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 CRTC1Q6UUV9 634 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 GCNT7Q6ZNI0 430 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 IQCHQ86VS3 1027 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 SLC25A41Q8N5S1 370 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 DENND6BQ8NEG7 585 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 FAM174AQ8TBP5 190 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 NETO1Q8TDF5 533 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 CENPTQ96BT3 561 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 LRRC45Q96CN5 670 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 BMFQ96LC9 184 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 OSBPL9Q96SU4 736 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 NAP1L3Q99457 506 aaPredicted RBP15.79■□□□□ 0.12
BRAT1-202ENST00000421712 MBNL1Q9NR56 388 aaKnown RBP15.79■□□□□ 0.12
BRAT1-202ENST00000421712 GOLGA6AQ9NYA3 693 aa15.79■□□□□ 0.12
BRAT1-202ENST00000421712 AAR2Q9Y312 384 aaKnown RBP15.79■□□□□ 0.12
BRAT1-202ENST00000421712 PIEZO1Q92508 2521 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 KNL1Q8NG31 2342 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 C1orf232A0A0U1RR37 186 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 CAPN8A6NHC0 703 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 CDX4O14627 284 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 SLC4A1P02730 911 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 LHCGRP22888 699 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 RABIFP47224 123 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 GDF10P55107 478 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 BNC1Q01954 994 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 IRF4Q15306 451 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 RSPO4Q2I0M5 234 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 WSCD2Q2TBF2 565 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 LRRC66Q68CR7 880 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 KDELC1Q6UW63 502 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 GSTA5Q7RTV2 222 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 HSD11B1LQ7Z5J1 315 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 C17orf53Q8N3J3 647 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 TAB3Q8N5C8 712 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 TP53I13Q8NBR0 393 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 OR13H1Q8NG92 308 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 CCHCR1Q8TD31 782 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 TADA1Q96BN2 335 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 NUS1Q96E22 293 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 OXNAD1Q96HP4 312 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 PPP1R2P1Q96PQ5 205 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 MCCC1Q96RQ3 725 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 KLF6Q99612 283 aaPredicted RBP15.78■□□□□ 0.12
BRAT1-202ENST00000421712 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 HOMER3Q9NSC5 361 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 SNX12Q9UMY4 172 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 ZKSCAN5Q9Y2L8 839 aa15.78■□□□□ 0.12
BRAT1-202ENST00000421712 LRRK1Q38SD2 2015 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 PSMD11O00231 422 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 GCATO75600 419 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 CLDN7O95471 211 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 PIRTP0C851 137 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 ZNF30P17039 623 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 SDHBP21912 280 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 IGFALSP35858 605 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 ETV3P41162 512 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 CTSKP43235 329 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 NXPH1P58417 271 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 OASLQ15646 514 aaKnown RBP15.77■□□□□ 0.12
BRAT1-202ENST00000421712 PARP6Q2NL67 630 aa15.77■□□□□ 0.12
BRAT1-202ENST00000421712 KYAT3Q6YP21 454 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms