RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 AKTIPQ9H8T0 292 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 ARMC1Q9NVT9 282 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 GIN1Q9NXP7 522 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 ANK1P16157 1881 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 UBFD1O14562 309 aaKnown RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 CHRNA4P43681 627 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 CDH17Q12864 832 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 SCIMPQ6UWF3 145 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 DSG4Q86SJ6 1040 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 CADM3Q8N126 398 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 ABHD11Q8NFV4 315 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 TRUB1Q8WWH5 349 aaKnown RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 POU2F3Q9UKI9 436 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 COL11A1P12107 1806 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 SOBPA7XYQ1 873 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 KPNA4O00629 521 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 ACOX3O15254 700 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 GMNNO75496 209 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 IPO13O94829 963 aaKnown RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 SIX3O95343 332 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 MAGP20916 626 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 TTKP33981 857 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 SHMT2P34897 504 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 HK2P52789 917 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 OCA2Q04671 838 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 ATP6AP1Q15904 470 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 INTS11Q5TA45 600 aaKnown RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 SAMD7Q7Z3H4 446 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 ITIH5Q86UX2 942 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 ADGRG5Q8IZF4 528 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 Q8N9G6 341 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 TUBGCP3Q96CW5 907 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 TRIM15Q9C019 465 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 SIAEQ9HAT2 523 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 EML4Q9HC35 981 aaKnown RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 RIC8BQ9NVN3 520 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 CPQQ9Y646 472 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 DNAH12Q6ZR08 3092 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 NPHS1O60500 1241 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 PRKAA2P54646 552 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 SLC25A52Q3SY17 297 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 PYCR3Q53H96 274 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 TMTC4Q5T4D3 741 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 CRTC3Q6UUV7 619 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 STK32CQ86UX6 486 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 ZNF354CQ86Y25 554 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 C11orf84Q9BUA3 381 aaPredicted RBP16.67■□□□□ 0.26
PKP4-204ENST00000421462 FICDQ9BVA6 458 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 SIK2Q9H0K1 926 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 ASB7Q9H672 318 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 SNTG2Q9NY99 539 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 KLK14Q9P0G3 267 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 NDUFAF1Q9Y375 327 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
PKP4-204ENST00000421462 A6NL46 340 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 AQP9O43315 295 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 BEST1O76090 585 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 RASAL1O95294 804 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 LINC00032P0C843 101 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 NPY2RP49146 381 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 IST1P53990 364 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 TPTEP56180 551 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 GALNT2Q10471 571 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 BTBD8Q5XKL5 378 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 ARHGAP36Q6ZRI8 547 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 OR52K2Q8NGK3 314 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 C19orf60Q96EN9 201 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 ZMAT2Q96NC0 199 aaKnown RBP16.67■□□□□ 0.26
PKP4-204ENST00000421462 OLFM1Q99784 485 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 PSME2Q9UL46 239 aa16.67■□□□□ 0.26
PKP4-204ENST00000421462 LDLRP01130 860 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 CPB1P15086 417 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 HPCAL1P37235 193 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 ECT2LQ008S8 904 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 DMPKQ09013 629 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 NFYCQ13952 458 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 CCNYL2Q5T2Q4 361 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 FAM45BPQ6NSW5 357 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 METTL7BQ6UX53 244 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 R3HCC1LQ7Z5L2 792 aaKnown RBP16.66■□□□□ 0.26
PKP4-204ENST00000421462 RALGPS2Q86X27 583 aaPredicted RBP16.66■□□□□ 0.26
PKP4-204ENST00000421462 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 TRPV3Q8NET8 790 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 FAM45AQ8TCE6 357 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 NRBF2Q96F24 287 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 CCDC97Q96F63 343 aaPredicted RBP16.66■□□□□ 0.26
PKP4-204ENST00000421462 FAM167AQ96KS9 214 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 GBA3Q9H227 469 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 MEAF6Q9HAF1 191 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 LRRC4Q9HBW1 653 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 SLAMF8Q9P0V8 285 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 ZNF229Q9UJW7 825 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 NOS2P35228 1153 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 PSMD8P48556 350 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 PLA2G16P53816 162 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 FOXA1P55317 472 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms