RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PLEKHA7Q6IQ23 1121 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 RTL3Q8N8U3 475 aaKnown RBP10.77□□□□□ -0.69
PTCH1-206ENST00000421141 LINGO1Q96FE5 620 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 SLC25A51Q9H1U9 297 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 FAM83DQ9H4H8 585 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.69
PTCH1-206ENST00000421141 UBDO15205 165 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 CDK14O94921 469 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 RXRGP48443 463 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 GPR17Q13304 367 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 NSL1Q96IY1 281 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 SERPINE1P05121 402 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 GJA5P36382 358 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 MBLAC2Q68D91 279 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 PRMT9Q6P2P2 845 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 GDPD4Q6W3E5 623 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 UNC5AQ6ZN44 842 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 SYT12Q8IV01 421 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 OR4K2Q8NGD2 314 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 CLP1Q92989 425 aaKnown RBP10.76□□□□□ -0.69
PTCH1-206ENST00000421141 CNDP1Q96KN2 507 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 C8orf48Q96LL4 319 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 GKN1Q9NS71 199 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 DNAJC28Q9NX36 388 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 FCF1Q9Y324 198 aaKnown RBP10.76□□□□□ -0.69
PTCH1-206ENST00000421141 M0R2N6 131 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 CCR4P51679 360 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 CHSY3Q70JA7 882 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 PARGQ86W56 976 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 CCDC185Q8N715 623 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 OR7D4Q8NG98 312 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 MS4A4AQ96JQ5 239 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 EBNA1BP2Q99848 306 aaKnown RBP10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ABI3Q9P2A4 366 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 COL11A1P12107 1806 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-206ENST00000421141 TRIM13O60858 407 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ALADP13716 330 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 FLT3P36888 993 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ARSIQ5FYB1 569 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 JOSD2Q8TAC2 188 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 EME1Q96AY2 570 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 NUS1Q96E22 293 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 CCT8L2Q96SF2 557 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 LRRC19Q9H756 370 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTCH1-206ENST00000421141 H0Y858 1186 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ATP6V0D1P61421 351 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 TXNDC8Q6A555 127 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 BRAT1Q6PJG6 821 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 QKIQ96PU8 341 aaKnown RBP eCLIP10.76□□□□□ -0.692e-7■■■■■ 29
PTCH1-206ENST00000421141 AIF1LQ9BQI0 150 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ADNPQ9H2P0 1102 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 WDR47O94967 919 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 EPN2O95208 641 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ALAS2P22557 587 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ATP13A4Q4VNC1 1196 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 BRSK1Q8TDC3 778 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 ZFYVE19Q96K21 471 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 NDNQ99608 321 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 BLOC1S6Q9UL45 172 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 PLXNA1Q9UIW2 1896 aa10.76□□□□□ -0.69
PTCH1-206ENST00000421141 DDX60LQ5H9U9 1706 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 PRAMEF1O95521 474 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CMPK1P30085 196 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 JAM2P57087 298 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 COPZ1P61923 177 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 RNF19BQ6ZMZ0 732 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 TRPM8Q7Z2W7 1104 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 MMAAQ8IVH4 418 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 HNRNPLLQ8WVV9 542 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CD101Q93033 1021 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ERP27Q96DN0 273 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 KLQ9UEF7 1012 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 MRTO4Q9UKD2 239 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 V9GYQ6 96 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 DNAJC25-GNG10A0A024R161 153 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 BCLAF3A2AJT9 711 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 LAMTOR5O43504 91 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CNPP09543 421 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 TAS2R40P59535 323 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 UAP1L1Q3KQV9 507 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CARD16Q5EG05 197 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 KHDRBS2Q5VWX1 349 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CAPN13Q6MZZ7 669 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ZC3H14Q6PJT7 736 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 TEX9Q8N6V9 391 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CYGBQ8WWM9 190 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 PRICKLE1Q96MT3 831 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 DACH2Q96NX9 599 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ERVK-5Q9HDB9 667 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 TCF7L2Q9NQB0 619 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 MTMR11A4FU01 709 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 MFSD11O43934 449 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 RHOP08100 348 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ETS1P14921 441 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 GJA1P17302 382 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 UBE2R2Q712K3 238 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 BTBD1Q9H0C5 482 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms