RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNF556Q9HAH1 456 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 SCPEP1Q9HB40 452 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 BPIFA1Q9NP55 256 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 C1RLQ9NZP8 487 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 INTS6Q9UL03 887 aaKnown RBP4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 SNX9Q9Y5X1 595 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 PLSCR5A0PG75 271 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 TMEM202A6NGA9 273 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 NPIPB15A6NHN6 443 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 PLRG1O43660 514 aaKnown RBP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 LINC00271P0C7V0 271 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 CPOXP36551 454 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 RRP1P56182 461 aaKnown RBP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 ILF3Q12906 894 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 SNTA1Q13424 505 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 AMZ1Q400G9 498 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 INTS11Q5TA45 600 aaKnown RBP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 INO80CQ6PI98 192 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 CPLX2Q6PUV4 134 aaKnown RBP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 MMS22LQ6ZRQ5 1243 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 ARMC8Q8IUR7 673 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 TSPYL6Q8N831 410 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 OR2AK2Q8NG84 335 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 KCNG4Q8TDN1 519 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 OTULINQ96BN8 352 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 ZNF570Q96NI8 536 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 PKP4Q99569 1192 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 PIP5K1AQ99755 562 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 H2AFJQ9BTM1 129 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 PREBQ9HCU5 417 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 CNGB3Q9NQW8 809 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 SLC6A13Q9NSD5 602 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 MALT1Q9UDY8 824 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 FBXO9Q9UK97 447 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 RCOR1Q9UKL0 485 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 PSAT1Q9Y617 370 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 NFS1Q9Y697 457 aa4.49□□□□□ -1.69
HMGB1P49-201ENST00000418882 PRSS44E7EML9 344 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 DDNO94850 711 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 PMS2P2O95744 297 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 TGFB3P10600 412 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 MAOAP21397 527 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 GPTP24298 496 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 DDIT3P35638 169 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 CASP6P55212 293 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 ERVFC1-1P60608 527 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 SORDQ00796 357 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 NEXNQ0ZGT2 675 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 G3BP1Q13283 466 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 SLC39A14Q15043 492 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 OASLQ15646 514 aaKnown RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 KIF19Q2TAC6 998 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 ALFQ53S48 1182 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 PPP6R3Q5H9R7 873 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 FAM76BQ5HYJ3 339 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 WDR73Q6P4I2 378 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 R3HCC1LQ7Z5L2 792 aaKnown RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 CHERPQ8IWX8 916 aaKnown RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 ZNF441Q8N8Z8 693 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 SPATA20Q8TB22 786 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 METTL6Q8TCB7 284 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 EVI5LQ96CN4 794 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 SLC41A2Q96JW4 573 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 C3orf30Q96M34 536 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 SEC62Q99442 399 aaKnown RBP4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 C1QTNF5Q9BXJ0 243 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 MMP25Q9NPA2 562 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 ABI3Q9P2A4 366 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 KCNS2Q9ULS6 477 aa4.48□□□□□ -1.69
HMGB1P49-201ENST00000418882 WDR81Q562E7 1941 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 MID1O15344 667 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 MTA2O94776 668 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 UBL4AP11441 157 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 CDAP32320 146 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 STX2P32856 288 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 ZNF155Q12901 538 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 NEDD9Q14511 834 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 SLC45A4Q5BKX6 768 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 CXorf66Q5JRM2 361 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 SATL1Q86VE3 508 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 NOC3LQ8WTT2 800 aaKnown RBP4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 PSPC1Q8WXF1 523 aaKnown RBP4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 SLITRK1Q96PX8 696 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 PCYT2Q99447 389 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 FAM110AQ9BQ89 295 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 PPP1R3EQ9H7J1 279 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 LRRC4Q9HBW1 653 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 GPR108Q9NPR9 543 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 PLSCR4Q9NRQ2 329 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 WWOXQ9NZC7 414 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 CEPT1Q9Y6K0 416 aa4.47□□□□□ -1.69
HMGB1P49-201ENST00000418882 A0A1W2PQF6 199 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 USP17L23D6RBM5 183 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 TULP2O00295 520 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 SLC16A5O15375 505 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 GAGE7O76087 117 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms