RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TARDBPQ13148 414 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 CNGA3Q16281 694 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 SLC9A4Q6AI14 798 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 HID1Q8IV36 788 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 RHOT1Q8IXI2 618 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 CCDC13Q8IYE1 715 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 CCDC170Q8IYT3 715 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 NDUFAF2Q8N183 169 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 CBARPQ8N350 705 aaPredicted RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 FSTL5Q8N475 847 aaPredicted RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 CCNYQ8ND76 341 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 MDM1Q8TC05 714 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 PIH1D2Q8WWB5 315 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 TSACCQ96A04 125 aaPredicted RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 WDR92Q96MX6 357 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 ZNF830Q96NB3 372 aaPredicted RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 MCCC1Q96RQ3 725 aaPredicted RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 MAK16Q9BXY0 300 aaKnown RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 RBSNQ9H1K0 784 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 DDX56Q9NY93 547 aaKnown RBP16.51■□□□□ 0.23
LINC00404-201ENST00000418660 DKK4Q9UBT3 224 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 LRRK1Q38SD2 2015 aa16.51■□□□□ 0.23
LINC00404-201ENST00000418660 FRYQ5TBA9 3013 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 PSMD11O00231 422 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 TAF4O00268 1085 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 CACNB4O00305 520 aaPredicted RBP16.5■□□□□ 0.23
LINC00404-201ENST00000418660 YY2O15391 372 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 KRT1P04264 644 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 ANXA6P08133 673 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 KRT10P13645 584 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 CTSEP14091 401 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 ZNF75DP51815 510 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 KIAA1024LP59773 190 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 SRP54P61011 504 aaKnown RBP16.5■□□□□ 0.23
LINC00404-201ENST00000418660 DSC2Q02487 901 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 ELOCQ15369 112 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 ODF2Q5BJF6 829 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 ESRP1Q6NXG1 681 aaKnown RBP16.5■□□□□ 0.23
LINC00404-201ENST00000418660 PNCKQ6P2M8 343 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 USP45Q70EL2 814 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 SDR16C5Q8N3Y7 309 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 PLD5Q8N7P1 536 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 TPCN2Q8NHX9 752 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 ARRDC2Q8TBH0 407 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 LRRN4Q8WUT4 740 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 GLMNQ92990 594 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 FUBP1Q96AE4 644 aaKnown RBP16.5■□□□□ 0.23
LINC00404-201ENST00000418660 MRFAP1L1Q96HT8 127 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 BOCQ9BWV1 1114 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 CLPBQ9H078 707 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 KLQ9UEF7 1012 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 CLCA2Q9UQC9 943 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 HYOU1Q9Y4L1 999 aa16.5■□□□□ 0.23
LINC00404-201ENST00000418660 TDRD6O60522 2096 aaKnown RBP16.5■□□□□ 0.23
LINC00404-201ENST00000418660 NPIPB15A6NHN6 443 aaPredicted RBP16.49■□□□□ 0.23
LINC00404-201ENST00000418660 APOL1O14791 398 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 SPOPO43791 374 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 OPA1O60313 960 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 TNFP01375 233 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 HLA-DQB2P05538 268 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 PDHA1P08559 390 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 ALPIP09923 528 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 IGF2RP11717 2491 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 ZFXP17010 805 aaPredicted RBP16.49■□□□□ 0.23
LINC00404-201ENST00000418660 CTPS1P17812 591 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 COMTP21964 271 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 LHCGRP22888 699 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 KELP23276 732 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 NOP2P46087 812 aaKnown RBP16.49■□□□□ 0.23
LINC00404-201ENST00000418660 RPIAP49247 311 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 CYP4F3Q08477 520 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 PPIDQ08752 370 aaKnown RBP16.49■□□□□ 0.23
LINC00404-201ENST00000418660 ARHGEF7Q14155 803 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 IHHQ14623 411 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 NR0B2Q15466 257 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 C6orf132Q5T0Z8 1188 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 RD3Q7Z3Z2 195 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 HSD11B1LQ7Z5J1 315 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 DCBLD1Q8N8Z6 715 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 OR56A4Q8NGH8 313 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 IFI44Q8TCB0 444 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 RNF25Q96BH1 459 aaPredicted RBP16.49■□□□□ 0.23
LINC00404-201ENST00000418660 NUS1Q96E22 293 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 DTD2Q96FN9 168 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 LGMNQ99538 433 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 TTLL3Q9Y4R7 772 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 PCDHA13Q9Y5I0 950 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 HEY1Q9Y5J3 304 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 DGKBQ9Y6T7 804 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 SHROOM3Q8TF72 1996 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 SPEGQ15772 3267 aa16.49■□□□□ 0.23
LINC00404-201ENST00000418660 EME2A4GXA9 379 aaPredicted RBP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 TMEM202A6NGA9 273 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 KCNK1O00180 336 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 PDE2AO00408 941 aaPredicted RBP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 TNFRSF10CO14798 259 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 MT-CO3P00414 261 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 JCHAINP01591 159 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms