RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 BMFQ96LC9 184 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 COQ10AQ96MF6 247 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 TMEM9BQ9NQ34 198 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 AASDHPPTQ9NRN7 309 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 ZKSCAN5Q9Y2L8 839 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 COQ6Q9Y2Z9 468 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 SNX11Q9Y5W9 270 aa18.71■□□□□ 0.59
PTCD3-204ENST00000418628 PIKFYVEQ9Y2I7 2098 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 SPTBN2O15020 2390 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.7■□□□□ 0.58
PTCD3-204ENST00000418628 POM121BA6NF01 834 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 C5orf60A6NFR6 353 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 ANKRD66B4E2M5 251 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 TM4SF5O14894 197 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 OPHN1O60890 802 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 ATP1A1P05023 1023 aaKnown RBP18.7■□□□□ 0.58
PTCD3-204ENST00000418628 ELFN1P0C7U0 828 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 ZNF883P0CG24 379 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 CYP2A6P11509 494 aaPredicted RBP18.7■□□□□ 0.58
PTCD3-204ENST00000418628 NFKBIAP25963 317 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 GDF10P55107 478 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 PFN3P60673 137 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 PTPRRQ15256 657 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 STPG1Q5TH74 334 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 DRICH1Q6PGQ1 229 aaPredicted RBP18.7■□□□□ 0.58
PTCD3-204ENST00000418628 IL27RAQ6UWB1 636 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 TSPAN33Q86UF1 283 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 MRGPRX2Q96LB1 330 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 MYOCQ99972 504 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 MLPHQ9BV36 600 aaPredicted RBP18.7■□□□□ 0.58
PTCD3-204ENST00000418628 DLL3Q9NYJ7 618 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 FAM153AQ9UHL3 310 aa18.7■□□□□ 0.58
PTCD3-204ENST00000418628 TTC7AQ9ULT0 858 aaPredicted RBP18.7■□□□□ 0.58
PTCD3-204ENST00000418628 LOC285095A0A1B0GVY8 99 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 A6NNZ2 444 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 TLR4O00206 839 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 SLC30A4O14863 429 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 KIF5CO60282 957 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 CER1O95813 267 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 FGGP02679 453 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 ATXN1LP0C7T5 689 aaKnown RBP18.69■□□□□ 0.58
PTCD3-204ENST00000418628 ZNF30P17039 623 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 CTPS1P17812 591 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 CXCR5P32302 372 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 HNF1BP35680 557 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 CLDN2P57739 230 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 CDK18Q07002 472 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 SGCGQ13326 291 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 MPP3Q13368 585 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 STAT4Q14765 748 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 IRF4Q15306 451 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 WSCD2Q2TBF2 565 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 ITPRIPL1Q6GPH6 555 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 CRTC1Q6UUV9 634 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 RAVER1Q8IY67 606 aaKnown RBP18.69■□□□□ 0.58
PTCD3-204ENST00000418628 LPCAT1Q8NF37 534 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 OR13H1Q8NG92 308 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 OR2I1PQ8NGU4 316 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 FERMT1Q9BQL6 677 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 TMEM121Q9BTD3 319 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 C1QTNF7Q9BXJ2 289 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 ERVMER34-1Q9H9K5 563 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 MBNL1Q9NR56 388 aaKnown RBP18.69■□□□□ 0.58
PTCD3-204ENST00000418628 RSPH14Q9UHP6 348 aa18.69■□□□□ 0.58
PTCD3-204ENST00000418628 FNDC3AQ9Y2H6 1198 aaKnown RBP18.69■□□□□ 0.58
PTCD3-204ENST00000418628 FANCGO15287 622 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 GCATO75600 419 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 RECQL5O94762 991 aaPredicted RBP18.68■□□□□ 0.58
PTCD3-204ENST00000418628 NDST3O95803 873 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 EPOP01588 193 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 PSMB4P28070 264 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 GALNT3Q14435 633 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 HLA-BQ31612 363 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 LRRC66Q68CR7 880 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 HSD11B1LQ7Z5J1 315 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 TECPR1Q7Z6L1 1165 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 ADAT2Q7Z6V5 191 aaKnown RBP18.68■□□□□ 0.58
PTCD3-204ENST00000418628 NDUFAF2Q8N183 169 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 CCDC110Q8TBZ0 833 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 DTD2Q96FN9 168 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 PBKQ96KB5 322 aa18.68■□□□□ 0.58
PTCD3-204ENST00000418628 C4orf47A7E2U8 309 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 CES2O00748 559 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 TOR1BO14657 336 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 FPGTO14772 594 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 MAGEC1O60732 1142 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 ITGAVP06756 1048 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 C1SP09871 688 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 THEGLP0DJG4 465 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 MSNP26038 577 aaKnown RBP18.67■□□□□ 0.58
PTCD3-204ENST00000418628 ADRA1AP35348 466 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 RABIFP47224 123 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 STC1P52823 247 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 WNT3AP56704 352 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 C21orf59P57076 290 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 LRRC14Q15048 493 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 SHBQ15464 509 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 CCNG2Q16589 344 aa18.67■□□□□ 0.58
PTCD3-204ENST00000418628 TPRG1LQ5T0D9 272 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms