RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 IMP4Q96G21 291 aaKnown RBP10.57□□□□□ -0.72
RFC1-203ENST00000418436 BMFQ96LC9 184 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 TEKT5Q96M29 485 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 QKIQ96PU8 341 aaKnown RBP eCLIP10.57□□□□□ -0.72
RFC1-203ENST00000418436 RTKNQ9BST9 563 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 ATP13A2Q9NQ11 1180 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 AASDHPPTQ9NRN7 309 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 CDV3Q9UKY7 258 aaKnown RBP10.57□□□□□ -0.72
RFC1-203ENST00000418436 PCDHB9Q9Y5E1 797 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 SNX11Q9Y5W9 270 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 CEP250Q9BV73 2442 aa10.57□□□□□ -0.72
RFC1-203ENST00000418436 ASCC3Q8N3C0 2202 aaKnown RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 RAD51BO15315 384 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 NEBLO76041 1014 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 TM7SF2O76062 418 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 CPP00450 1065 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 PRLP01236 227 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 PRKCGP05129 697 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 PDHA1P08559 390 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 ZNF883P0CG24 379 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 LIG3P49916 1009 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 ATXN3P54252 364 aaPredicted RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 NXPH1P58417 271 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 OTUD4Q01804 1114 aaKnown RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 SGCGQ13326 291 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 SLC14A1Q13336 389 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 PUM1Q14671 1186 aaKnown RBP eCLIP10.56□□□□□ -0.726e-7■■■□□ 16.1
RFC1-203ENST00000418436 SLC14A2Q15849 920 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 FAM182AQ5T1J6 154 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 ARMC12Q5T9G4 340 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 GCNT7Q6ZNI0 430 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 ADAT2Q7Z6V5 191 aaKnown RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 REXO1L1PQ8IX06 675 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 TRIM58Q8NG06 486 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 OR2I1PQ8NGU4 316 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 PDCD6IPQ8WUM4 868 aaKnown RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 HTR3CQ8WXA8 447 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 ZNF775Q96BV0 537 aaPredicted RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 SCRN2Q96FV2 425 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 AGAP3Q96P47 875 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 ALS2CR12Q96Q35 445 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 MCCC1Q96RQ3 725 aaPredicted RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 VAT1Q99536 393 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 WRAP53Q9BUR4 548 aaKnown RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 GTPBP2Q9BX10 602 aaKnown RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 TDRD1Q9BXT4 1180 aaKnown RBP10.56□□□□□ -0.72
RFC1-203ENST00000418436 CEP41Q9BYV8 373 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 SLC25A51Q9H1U9 297 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 GAREM1Q9H706 876 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 ERVMER34-1Q9H9K5 563 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 GLOD4Q9HC38 313 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 FZD3Q9NPG1 666 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 GPR27Q9NS67 375 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 SEPT10Q9P0V9 454 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 CA5BQ9Y2D0 317 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 DCHS1Q96JQ0 3298 aa10.56□□□□□ -0.72
RFC1-203ENST00000418436 H0Y8X5 98 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 DFNA5O60443 496 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 MAGEC1O60732 1142 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 OPHN1O60890 802 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 CER1O95813 267 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 RBP3P10745 1247 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 C6P13671 934 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 GM2AP17900 193 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 CA4P22748 312 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 NFKBIAP25963 317 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 RBL1P28749 1068 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 CD68P34810 354 aaPredicted RBP10.55□□□□□ -0.72
RFC1-203ENST00000418436 CD86P42081 329 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 ID4P47928 161 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 C21orf59P57076 290 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 CLDN2P57739 230 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 RPL26P61254 145 aaKnown RBP10.55□□□□□ -0.72
RFC1-203ENST00000418436 FAM193AP78312 1265 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 SEMG2Q02383 582 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 RPS6KA1Q15418 735 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 CCDC181Q5TID7 509 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 LIPIQ6XZB0 460 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 KYAT3Q6YP21 454 aaKnown RBP10.55□□□□□ -0.72
RFC1-203ENST00000418436 DBX2Q6ZNG2 339 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 SPATS2Q86XZ4 545 aaKnown RBP10.55□□□□□ -0.72
RFC1-203ENST00000418436 ZNF567Q8N184 647 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.55□□□□□ -0.72
RFC1-203ENST00000418436 TP53I13Q8NBR0 393 aaPredicted RBP10.55□□□□□ -0.72
RFC1-203ENST00000418436 KLHDC7BQ96G42 594 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 TRIB3Q96RU7 358 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 TLR10Q9BXR5 811 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 CARD9Q9H257 536 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 IL21RQ9HBE5 538 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 PCDH9Q9HC56 1237 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 B4GALT6Q9UBX8 382 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 RPL26L1Q9UNX3 145 aaKnown RBP10.55□□□□□ -0.72
RFC1-203ENST00000418436 CHKBQ9Y259 395 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 TTLL3Q9Y4R7 772 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 KNL1Q8NG31 2342 aa10.55□□□□□ -0.72
RFC1-203ENST00000418436 DNAH14Q0VDD8 3507 aa10.54□□□□□ -0.72
RFC1-203ENST00000418436 SPTBN4Q9H254 2564 aa10.54□□□□□ -0.72
RFC1-203ENST00000418436 A0A0J9YYE9 177 aa10.54□□□□□ -0.72
RFC1-203ENST00000418436 A0A1B0GTQ1 180 aa10.54□□□□□ -0.72
RFC1-203ENST00000418436 TCRBV7S2A1N4TA0A589 114 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms