RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 EMC2Q15006 297 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CCDC58Q4VC31 144 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 RFPL4BQ6ZWI9 263 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 BPHLQ86WA6 291 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 SYTL5Q8TDW5 730 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 TWNKQ96RR1 684 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 BCO2Q9BYV7 579 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CNGB3Q9NQW8 809 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 MAP10Q9P2G4 905 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PRELID1Q9Y255 219 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 FIS1Q9Y3D6 152 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 MGAMO43451 1857 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 KIAA1217Q5T5P2 1943 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 LOC105371267A0A1B0GV96 52 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TCRBV5S2A0A599 114 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ALX3O95076 343 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 MYCLP12524 364 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ALDH7A1P49419 539 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 CDH8P55286 799 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ACTR2P61160 394 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 PRKCEQ02156 737 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 SELPLGQ14242 412 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 NCBP2-AS2Q69YL0 99 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TMC5Q6UXY8 1006 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 LYSMD2Q8IV50 215 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TTC39CQ8N584 583 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 OR13J1Q8NGT2 312 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 RHOXF1Q8NHV9 184 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TMEM143Q96AN5 459 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 LGMNQ99538 433 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 CEP41Q9BYV8 373 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 MRM3Q9HC36 420 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 NECTIN3Q9NQS3 549 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 HMGXB4Q9UGU5 601 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 GTF2IRD1Q9UHL9 959 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TBKBP1A7MCY6 615 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TTC34A8MYJ7 566 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 FXYD1O00168 92 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 AXIN1O15169 862 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 INPP4BO15327 924 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 UPK1BO75841 260 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 HNRNPLP14866 589 aaKnown RBP eCLIP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 IL7RP16871 459 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 SDC4P31431 198 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 CD68P34810 354 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 STX1BP61266 288 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TFAMQ00059 246 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ADPRMQ3LIE5 342 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ZIK1Q3SY52 487 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 WDR45BQ5MNZ6 344 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 SWSAP1Q6NVH7 229 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TAF2Q6P1X5 1199 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 KCNMB4Q86W47 210 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 AFAP1L2Q8N4X5 818 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TXNDC5Q8NBS9 432 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 OR52K1Q8NGK4 314 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 NDNFQ8TB73 568 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 OSCP1Q8WVF1 389 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ELMO2Q96JJ3 720 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 CSPG4P5Q96PW8 444 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 CDK5RAP1Q96SZ6 601 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 BTBD2Q9BX70 525 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 CMTM6Q9NX76 183 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 FZD1Q9UP38 647 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 EIF3LQ9Y262 564 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TCP10L2B9ZVM9 353 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ABCB1P08183 1280 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 GRK3P35626 688 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 PGGT1BP53609 377 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ARSFP54793 590 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 DNAJB13P59910 316 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 USP10Q14694 798 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 SPATS1Q496A3 300 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 MTERF2Q49AM1 385 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 CATSPEREQ5SY80 951 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 UBE2UQ5VVX9 321 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ADCK1Q86TW2 530 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ZC3HC1Q86WB0 502 aaKnown RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 C8orf59Q8N0T1 100 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 UBA3Q8TBC4 463 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 SUN5Q8TC36 379 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 HCAR2Q8TDS4 363 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 EGLN2Q96KS0 407 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 GPR78Q96P69 363 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 TAAR1Q96RJ0 339 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ELOVL4Q9GZR5 314 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 PORCNQ9H237 461 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 MUC13Q9H3R2 512 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 IL1RL2Q9HB29 575 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 SLCO3A1Q9UIG8 710 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ANAPC2Q9UJX6 822 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 VANGL2Q9ULK5 521 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 PDE10AQ9Y233 779 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 NAALAD2Q9Y3Q0 740 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 UGT2A1Q9Y4X1 527 aa8.04□□□□□ -1.12
HMGXB4-202ENST00000418170 ANK1P16157 1881 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms