RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 LIPIQ6XZB0 460 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 KDELC2Q7Z4H8 507 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.41
SKA1-203ENST00000417656 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 IFT43Q96FT9 208 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 WDR24Q96S15 920 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 KLF6Q99612 283 aaPredicted RBP12.52□□□□□ -0.41
SKA1-203ENST00000417656 SMARCAL1Q9NZC9 954 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 FAM153AQ9UHL3 310 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 RPL26L1Q9UNX3 145 aaKnown RBP12.52□□□□□ -0.41
SKA1-203ENST00000417656 ANKRD6Q9Y2G4 727 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 SNX11Q9Y5W9 270 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 WDR87Q6ZQQ6 2873 aa12.52□□□□□ -0.41
SKA1-203ENST00000417656 SCN8AQ9UQD0 1980 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 A6NNZ2 444 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 OPHN1O60890 802 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 ZNF189O75820 626 aaPredicted RBP12.51□□□□□ -0.41
SKA1-203ENST00000417656 SYPP08247 313 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 NFKBIAP25963 317 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 HNF1BP35680 557 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 ATXN3P54252 364 aaPredicted RBP12.51□□□□□ -0.41
SKA1-203ENST00000417656 WNT3AP56704 352 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 CDK18Q07002 472 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 STAT4Q14765 748 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 ACOX1Q15067 660 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 LRRC66Q68CR7 880 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
SKA1-203ENST00000417656 ARHGEF18Q6ZSZ5 1173 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 ABI3BPQ7Z7G0 1075 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 RASGEF1CQ8N431 466 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 MINDY1Q8N5J2 469 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 TP53I13Q8NBR0 393 aaPredicted RBP12.51□□□□□ -0.41
SKA1-203ENST00000417656 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 COG1Q8WTW3 980 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 ASB12Q8WXK4 309 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 SCRN2Q96FV2 425 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 PBKQ96KB5 322 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 OSBPL9Q96SU4 736 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 MLPHQ9BV36 600 aaPredicted RBP12.51□□□□□ -0.41
SKA1-203ENST00000417656 C1QTNF7Q9BXJ2 289 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 ADGRE3Q9BY15 652 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 FRMD8P1Q9BZ68 369 aaPredicted RBP12.51□□□□□ -0.41
SKA1-203ENST00000417656 TMEM9BQ9NQ34 198 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 MBNL1Q9NR56 388 aaKnown RBP12.51□□□□□ -0.41
SKA1-203ENST00000417656 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 PPIL1Q9Y3C6 166 aa12.51□□□□□ -0.41
SKA1-203ENST00000417656 LAMA1P25391 3075 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 POM121BA6NF01 834 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 C5orf60A6NFR6 353 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
SKA1-203ENST00000417656 FPGTO14772 594 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 RECQL5O94762 991 aaPredicted RBP12.5□□□□□ -0.41
SKA1-203ENST00000417656 NDST3O95803 873 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 SLC4A1P02730 911 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 PCCBP05166 539 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 C1SP09871 688 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 PIRTP0C851 137 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 THEGLP0DJG4 465 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 CTSKP43235 329 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 CHRNA4P43681 627 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 GEMP55040 296 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 NXPH1P58417 271 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 MPP3Q13368 585 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 ARHGEF7Q14155 803 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 FAXCQ5TGI0 409 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 STPG1Q5TH74 334 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 CRTC1Q6UUV9 634 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 HSD11B1LQ7Z5J1 315 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
SKA1-203ENST00000417656 MFSD2AQ8NA29 543 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 NETO1Q8TDF5 533 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 MAIP1Q8WWC4 291 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 CENPTQ96BT3 561 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 RTP4Q96DX8 246 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 NUS1Q96E22 293 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 MRGPRX2Q96LB1 330 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 BMFQ96LC9 184 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 COQ10AQ96MF6 247 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 LENG8Q96PV6 779 aaPredicted RBP12.5□□□□□ -0.41
SKA1-203ENST00000417656 FICDQ9BVA6 458 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 FSD1LQ9BXM9 530 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 ZDHHC5Q9C0B5 715 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 IL21RQ9HBE5 538 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 FNDC3AQ9Y2H6 1198 aaKnown RBP12.5□□□□□ -0.41
SKA1-203ENST00000417656 MYLKQ15746 1914 aa12.5□□□□□ -0.41
SKA1-203ENST00000417656 C1orf232A0A0U1RR37 186 aa12.49□□□□□ -0.41
SKA1-203ENST00000417656 C4orf47A7E2U8 309 aa12.49□□□□□ -0.41
SKA1-203ENST00000417656 ANKRD66B4E2M5 251 aa12.49□□□□□ -0.41
SKA1-203ENST00000417656 TLR4O00206 839 aa12.49□□□□□ -0.41
SKA1-203ENST00000417656 PGRMC1O00264 195 aaKnown RBP12.49□□□□□ -0.41
SKA1-203ENST00000417656 ZNF185O15231 689 aa12.49□□□□□ -0.41
SKA1-203ENST00000417656 FANCGO15287 622 aa12.49□□□□□ -0.41
SKA1-203ENST00000417656 ANXA9O76027 345 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms