RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PRAMEP78395 509 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 IKBKEQ14164 716 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 GEN1Q17RS7 908 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 SLC39A12Q504Y0 691 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 MARC1Q5VT66 337 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 SPRYD7Q5W111 196 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 HMBOX1Q6NT76 420 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 LARP4Q71RC2 724 aaKnown RBP eCLIP14.52□□□□□ -0.08
HDAC9-208ENST00000417496 TMEM126BQ8IUX1 230 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 AHI1Q8N157 1196 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 RPL10LQ96L21 214 aaKnown RBP14.52□□□□□ -0.08
HDAC9-208ENST00000417496 PRKD2Q9BZL6 878 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 AKTIPQ9H8T0 292 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 SUCOQ9UBS9 1254 aaKnown RBP14.52□□□□□ -0.08
HDAC9-208ENST00000417496 ARL5AQ9Y689 179 aa14.52□□□□□ -0.08
HDAC9-208ENST00000417496 NYNRINQ9P2P1 1898 aaKnown RBP14.52□□□□□ -0.08
HDAC9-208ENST00000417496 LAMA3Q16787 3333 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 CAPNS1P04632 268 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 HMBSP08397 361 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 RBP1P09455 135 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 PSMC3P17980 439 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 UGT1A6P19224 532 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 IMPDH1P20839 514 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 GRK4P32298 578 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 LAMB3Q13751 1172 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 PSMD5Q16401 504 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 VPS26BQ4G0F5 336 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 UNC50Q53HI1 259 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 SIRPB2Q5JXA9 342 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 ZNF678Q5SXM1 525 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 KIAA0408Q6ZU52 694 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 PGBD5Q8N414 524 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 CANT1Q8WVQ1 401 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 TMIGD2Q96BF3 282 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 HIC2Q96JB3 615 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 RBM38Q9H0Z9 239 aaKnown RBP14.52□□□□□ -0.09
HDAC9-208ENST00000417496 ZNF696Q9H7X3 374 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 CD300AQ9UGN4 299 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 EGFL7Q9UHF1 273 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 DNAJC15Q9Y5T4 150 aa14.52□□□□□ -0.09
HDAC9-208ENST00000417496 FAM149AA5PLN7 773 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 B4GALT3O60512 393 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 C8BP07358 591 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 THPOP40225 353 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 GRIA3P42263 894 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 RENBPP51606 427 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 CLCN5P51795 746 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 RPS6KA3P51812 740 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 USP46P62068 366 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 CAPRIN1Q14444 709 aaKnown RBP14.51□□□□□ -0.09
HDAC9-208ENST00000417496 PFKFB4Q16877 469 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 KIF19Q2TAC6 998 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 ZNF549Q6P9A3 640 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 MIB1Q86YT6 1006 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 CCDC117Q8IWD4 279 aaPredicted RBP14.51□□□□□ -0.09
HDAC9-208ENST00000417496 BLOC1S5Q8TDH9 187 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 DIS3LQ8TF46 1054 aaKnown RBP14.51□□□□□ -0.09
HDAC9-208ENST00000417496 C19orf60Q96EN9 201 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 MRPS26Q9BYN8 205 aaKnown RBP14.51□□□□□ -0.09
HDAC9-208ENST00000417496 SLC2A11Q9BYW1 496 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 ARNT2Q9HBZ2 717 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 RGS18Q9NS28 235 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 POLR3BQ9NW08 1133 aaPredicted RBP14.51□□□□□ -0.09
HDAC9-208ENST00000417496 CROTQ9UKG9 612 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 ARHGEF37A1IGU5 675 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 NR5A2O00482 541 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 TPST1O60507 370 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 SOAT2O75908 522 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 GRB7Q14451 532 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 SEMA3AQ14563 771 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 UGT3A2Q3SY77 523 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 CALML6Q8TD86 181 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 CCDC126Q96EE4 140 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 RANBP9Q96S59 729 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 TMEM79Q9BSE2 394 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 EPB41L1Q9H4G0 881 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 CAAP1Q9H8G2 361 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 ACTL7AQ9Y615 435 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 ZNF236Q9UL36 1845 aa14.51□□□□□ -0.09
HDAC9-208ENST00000417496 H3BMM5 538 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 UBXN8O00124 270 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 CYP11A1P05108 521 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 RGS2P41220 211 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 INHBCP55103 352 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 ECT2LQ008S8 904 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 TIAL1Q01085 375 aaKnown RBP eCLIP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 TSPY1Q01534 308 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 EFEMP1Q12805 493 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 MS4A13Q5J8X5 152 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 CHERPQ8IWX8 916 aaKnown RBP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 TTC9BQ8N6N2 239 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 STON2Q8WXE9 905 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 IGSF8Q969P0 613 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 FAR2Q96K12 515 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 ADAM2Q99965 735 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 SLC25A23Q9BV35 468 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 ATP13A1Q9HD20 1204 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 TMEM181Q9P2C4 612 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms