RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 GULP1Q9UBP9 304 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 NENFQ9UMX5 172 aa25.42■■□□□ 1.66
VEGFA-208ENST00000417285 TPM1P09493 284 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 CR2P20023 1033 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 ACOX1Q15067 660 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 TSR1Q2NL82 804 aaKnown RBP25.41■■□□□ 1.66
VEGFA-208ENST00000417285 PERM1Q5SV97 790 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 MARC1Q5VT66 337 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 IGF2-ASQ6U949 168 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 ATPAF2Q8N5M1 289 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 ZNF248Q8NDW4 579 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 OR8K1Q8NGG5 319 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 OR56A4Q8NGH8 313 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 CTNNBL1Q8WYA6 563 aaPredicted RBP25.41■■□□□ 1.66
VEGFA-208ENST00000417285 RBM15Q96T37 977 aaKnown RBP eCLIP25.41■■□□□ 1.661e-8■■□□□ 12.7
VEGFA-208ENST00000417285 DEF6Q9H4E7 631 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 NOD2Q9HC29 1040 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 ZNHIT6Q9NWK9 470 aaKnown RBP25.41■■□□□ 1.66
VEGFA-208ENST00000417285 CTTNBP2NLQ9P2B4 639 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 UVRAGQ9P2Y5 699 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 PHTF1Q9UMS5 762 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 GPR34Q9UPC5 381 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 PCDHGC4Q9Y5F7 938 aa25.41■■□□□ 1.66
VEGFA-208ENST00000417285 H2AFZP0C0S5 128 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 PCBP4P57723 403 aaKnown RBP25.4■■□□□ 1.66
VEGFA-208ENST00000417285 SLC18A3Q16572 532 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 PNCKQ6P2M8 343 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 H2AFVQ71UI9 128 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 FAM71BQ8TC56 605 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 FUBP1Q96AE4 644 aaKnown RBP25.4■■□□□ 1.66
VEGFA-208ENST00000417285 NSMCE3Q96MG7 304 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 CCDC3Q9BQI4 270 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 MGME1Q9BQP7 344 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 B4GALT6Q9UBX8 382 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 LCMT1Q9UIC8 334 aa25.4■■□□□ 1.66
VEGFA-208ENST00000417285 BPTFQ12830 3046 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 CELA2BP08218 269 aaPredicted RBP25.39■■□□□ 1.66
VEGFA-208ENST00000417285 IL4RP24394 825 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 RBMS1P29558 406 aaKnown RBP25.39■■□□□ 1.66
VEGFA-208ENST00000417285 MMP13P45452 471 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 PCDH19Q8TAB3 1148 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 HIC2Q96JB3 615 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 COQ10AQ96MF6 247 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 DNAJC7Q99615 494 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 PRORYQ9H606 182 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 THSD1Q9NS62 852 aa25.39■■□□□ 1.66
VEGFA-208ENST00000417285 LOC400499M0QZD8 3231 aa25.39■■□□□ 1.65
VEGFA-208ENST00000417285 SSU72P8A0A1W2PR75 194 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 TTC24A2A3L6 582 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-208ENST00000417285 A8MX80 341 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 CYP2A6P11509 494 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-208ENST00000417285 KRT10P13645 584 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 VIPR1P32241 457 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 CCDC173Q0VFZ6 552 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 SPIDRQ14159 915 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 CBARPQ8N350 705 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-208ENST00000417285 PGBD5Q8N414 524 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 PDCD6IPQ8WUM4 868 aaKnown RBP25.38■■□□□ 1.65
VEGFA-208ENST00000417285 ATXN7L3BQ96GX2 97 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 LGMNQ99538 433 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 WDR26Q9H7D7 661 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 PCDHGA8Q9Y5G5 932 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 ENTPD2Q9Y5L3 495 aa25.38■■□□□ 1.65
VEGFA-208ENST00000417285 PTPRQQ9UMZ3 2332 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 TMEM202A6NGA9 273 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 TMX2-CTNND1H3BSU7 103 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 PROSCO94903 275 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 CPP00450 1065 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 GM2AP17900 193 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 CES1P23141 567 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 OGFOD3Q6PK18 319 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 CRTC1Q6UUV9 634 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 MAP7D3Q8IWC1 876 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 NDUFAF2Q8N183 169 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 TEX26Q8N6G2 289 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 OR1E3Q8WZA6 343 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 SCRN2Q96FV2 425 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 CRELD1Q96HD1 420 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 SLC46A1Q96NT5 459 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 SIRPGQ9P1W8 387 aa25.37■■□□□ 1.65
VEGFA-208ENST00000417285 PSMD11O00231 422 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 NTN3O00634 580 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-208ENST00000417285 AKR1B10O60218 316 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 HEXIM1O94992 359 aaKnown RBP25.36■■□□□ 1.65
VEGFA-208ENST00000417285 GJC1P36383 396 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 MLLT3P42568 568 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-208ENST00000417285 TLE3Q04726 772 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 ASTE1Q2TB18 679 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-208ENST00000417285 ARMC12Q5T9G4 340 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 TAF8Q7Z7C8 310 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 VSTM4Q8IW00 320 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 SPACA3Q8IXA5 215 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 KYQ8NBH2 561 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 KCTD6Q8NC69 237 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 WDR36Q8NI36 951 aaKnown RBP25.36■■□□□ 1.65
VEGFA-208ENST00000417285 NUS1Q96E22 293 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 UBL7Q96S82 380 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-208ENST00000417285 PACSIN1Q9BY11 444 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 ASCL3Q9NQ33 180 aa25.36■■□□□ 1.65
VEGFA-208ENST00000417285 HAUS2Q9NVX0 235 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms