RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 GDPD4Q6W3E5 623 aa14.61□□□□□ -0.07
SGCE-202ENST00000415788 MMAAQ8IVH4 418 aaKnown RBP14.61□□□□□ -0.07
SGCE-202ENST00000415788 DTWD2Q8NBA8 298 aa14.61□□□□□ -0.07
SGCE-202ENST00000415788 PIP4K2CQ8TBX8 421 aa14.61□□□□□ -0.07
SGCE-202ENST00000415788 SIPA1Q96FS4 1042 aa14.61□□□□□ -0.07
SGCE-202ENST00000415788 CDC42EP4Q9H3Q1 356 aaKnown RBP14.61□□□□□ -0.07
SGCE-202ENST00000415788 PRMT8Q9NR22 394 aaPredicted RBP14.61□□□□□ -0.07
SGCE-202ENST00000415788 SPATS2LQ9NUQ6 558 aaKnown RBP14.61□□□□□ -0.07
SGCE-202ENST00000415788 LAMTOR5O43504 91 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 DNTTP04053 509 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 CTSLP07711 333 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 GABRG2P18507 467 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 FDFT1P37268 417 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 NUBP1P53384 320 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 NRLP54845 237 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 RPS14P62263 151 aaKnown RBP14.6□□□□□ -0.07
SGCE-202ENST00000415788 NIPAL4Q0D2K0 466 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 ZNF805Q5CZA5 627 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 PPP1R21Q6ZMI0 780 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 RASSF3Q86WH2 238 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 C1orf210Q8IVY1 113 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 CFAP61Q8NHU2 1237 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 SPOCK2Q92563 424 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 HHIPQ96QV1 700 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 SUV39H2Q9H5I1 410 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 C11orf16Q9NQ32 467 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 DYRK4Q9NR20 520 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 POLR3BQ9NW08 1133 aaPredicted RBP14.6□□□□□ -0.07
SGCE-202ENST00000415788 C2orf42Q9NWW7 574 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 DKK3Q9UBP4 350 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 EBF1Q9UH73 591 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 LGALS13Q9UHV8 139 aa14.6□□□□□ -0.07
SGCE-202ENST00000415788 KPNA3O00505 521 aaPredicted RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 UNC5CO95185 931 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 UGT2B4P06133 528 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 NDUFV2P19404 249 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 ITGB7P26010 798 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 CD86P42081 329 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 PSMD8P48556 350 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 GEMP55040 296 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 MPP3Q13368 585 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 CCDC38Q502W7 563 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 TMEM31Q5JXX7 168 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 BRAT1Q6PJG6 821 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 PRPF39Q86UA1 669 aaKnown RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 KIRREL3Q8IZU9 778 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 AGGF1Q8N302 714 aaeCLIP14.59□□□□□ -0.07
SGCE-202ENST00000415788 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.59□□□□□ -0.07
SGCE-202ENST00000415788 FITM2Q8N6M3 262 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 UHMK1Q8TAS1 419 aaKnown RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 HMGB4Q8WW32 186 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 VOPP1Q96AW1 172 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 SLC24A3Q9HC58 644 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 NKIRAS1Q9NYS0 192 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 CTNNAL1Q9UBT7 734 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 NEU2Q9Y3R4 380 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 ARIH1Q9Y4X5 557 aaPredicted RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 CKAP5Q14008 2032 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 SHROOM3Q8TF72 1996 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 MYO18AQ92614 2054 aaKnown RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 CCDC163A0A0D9SF12 145 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 FAM86C2PA6NEL3 165 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 K7ESF4 209 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 TRAFD1O14545 582 aaPredicted RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 PSMD3O43242 534 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 HTRA2O43464 458 aaPredicted RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 GJB3O75712 270 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 MMP2P08253 660 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 ACADMP11310 421 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 PSMB4P28070 264 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 GKP32189 559 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 STX2P32856 288 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 RPL22P35268 128 aaKnown RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 ANO7Q6IWH7 933 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 CEP128Q6ZU80 1094 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 USP30Q70CQ3 517 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 KBTBD6Q86V97 674 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 CAMK1DQ8IU85 385 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 PGBD3Q8N328 593 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 MDGA1Q8NFP4 955 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 ECHDC3Q96DC8 303 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 RBM15Q96T37 977 aaKnown RBP eCLIP14.59□□□□□ -0.07
SGCE-202ENST00000415788 TDRD1Q9BXT4 1180 aaKnown RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 KCNK9Q9NPC2 374 aa14.59□□□□□ -0.07
SGCE-202ENST00000415788 RPL26L1Q9UNX3 145 aaKnown RBP14.59□□□□□ -0.07
SGCE-202ENST00000415788 TSPAN11A1L157 253 aa14.58□□□□□ -0.08
SGCE-202ENST00000415788 TTC24A2A3L6 582 aaPredicted RBP14.58□□□□□ -0.08
SGCE-202ENST00000415788 A6NHS1 94 aa14.58□□□□□ -0.08
SGCE-202ENST00000415788 ERI2A8K979 691 aaKnown RBP14.58□□□□□ -0.08
SGCE-202ENST00000415788 ZNF217O75362 1048 aa14.58□□□□□ -0.08
SGCE-202ENST00000415788 PIGNO95427 931 aa14.58□□□□□ -0.08
SGCE-202ENST00000415788 TTC4O95801 387 aa14.58□□□□□ -0.08
SGCE-202ENST00000415788 BRAFP15056 766 aa14.58□□□□□ -0.08
SGCE-202ENST00000415788 NFKBIAP25963 317 aa14.58□□□□□ -0.08
SGCE-202ENST00000415788 RPL26P61254 145 aaKnown RBP14.58□□□□□ -0.08
SGCE-202ENST00000415788 POLR2LP62875 67 aaKnown RBP14.58□□□□□ -0.08
SGCE-202ENST00000415788 LRRC14Q15048 493 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms