RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 APOA4P06727 396 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 GJA1P17302 382 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 GP5P40197 560 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PBX2P40425 430 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SERPINB8P50452 374 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PRKAA2P54646 552 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SESN2P58004 480 aaPredicted RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 NIPAL4Q0D2K0 466 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 CDC16Q13042 620 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 TEDDM1Q5T9Z0 273 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PDPK2PQ6A1A2 396 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 POTEHQ6S545 545 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 KDELC1Q6UW63 502 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 MPP5Q8N3R9 675 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 CATSPER1Q8NEC5 780 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 OR7D4Q8NG98 312 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SPATA22Q8NHS9 363 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 OTUB2Q96DC9 234 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 TCEAL4Q96EI5 215 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PSKH2Q96QS6 385 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 CPNE1Q99829 537 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 MGME1Q9BQP7 344 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 FSD1LQ9BXM9 530 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 MUC3BQ9H195 1237 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 NKX2-4Q9H2Z4 354 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SFXN1Q9H9B4 322 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 ARNT2Q9HBZ2 717 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 TDP1Q9NUW8 608 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SYBUQ9NX95 663 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 TBC1D14Q9P2M4 693 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 CHD9Q3L8U1 2897 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 A0A088AWK7 358 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 GOLGA8QA0A0J9YX86 632 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 GOLGA8OA6NCC3 632 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 GOLGA8NF8WBI6 632 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PER2O15055 1255 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SLC22A2O15244 555 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 MT-CYBP00156 380 aaPredicted RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 MPOP05164 745 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 RALBP11234 206 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 FGF3P11487 239 aaPredicted RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 SPRP35270 261 aaPredicted RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 CPOXP36551 454 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 ABCE1P61221 599 aaKnown RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 USP4Q13107 963 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SLC12A1Q13621 1099 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 CDH18Q13634 790 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 KCNC3Q14003 757 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 UBAP2LQ14157 1087 aaKnown RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 SLC5A9Q2M3M2 681 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 INO80DQ53TQ3 878 aaPredicted RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 THEMIS2Q5TEJ8 643 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 RNF220Q5VTB9 566 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 RNF219Q5W0B1 726 aaPredicted RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 TRMT10BQ6PF06 316 aaKnown RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 RANBP10Q6VN20 620 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 ADGRD2Q7Z7M1 963 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 METTL3Q86U44 580 aaKnown RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 TMEM135Q86UB9 458 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PDSS2Q86YH6 399 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 TMEM126BQ8IUX1 230 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 BBS7Q8IWZ6 715 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 CARNMT1Q8N4J0 409 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 DCAF4L2Q8NA75 395 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 IPMKQ8NFU5 416 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 OR52K2Q8NGK3 314 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 STON2Q8WXE9 905 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 MRGPRX2Q96LB1 330 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 TSNARE1Q96NA8 513 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 BTBD9Q96Q07 612 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SPON2Q9BUD6 331 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 SLC28A3Q9HAS3 691 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PLAC1Q9HBJ0 212 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 MRM3Q9HC36 420 aaKnown RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 MRGBPQ9NV56 204 aa11.63□□□□□ -0.55
RFFL-205ENST00000415395 PRPF19Q9UMS4 504 aaKnown RBP11.63□□□□□ -0.55
RFFL-205ENST00000415395 LAMA2P24043 3122 aaKnown RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 MYO7AQ13402 2215 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 NRG2O14511 850 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 TPP1O14773 563 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 UGT1A9O60656 530 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 SIN3BO75182 1162 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 USP12O75317 370 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 EPOP01588 193 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 PROCP04070 461 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 ITGA2BP08514 1039 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 UBTFL6P0CB48 400 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 TYK2P29597 1187 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 BMP8BP34820 402 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 HADHAP40939 763 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 POLE2P56282 527 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 WNT3AP56704 352 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 BTKQ06187 659 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 ITKQ08881 620 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 ZNF77Q15935 545 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 PDCD2Q16342 344 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 HSF5Q4G112 596 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 RALGPS1Q5JS13 557 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms