RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 FADS3Q9Y5Q0 445 aa13.15□□□□□ -0.3
CNOT4-204ENST00000414802 C1orf232A0A0U1RR37 186 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 NEMP1O14524 444 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 NDC80O14777 642 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 AREL1O15033 823 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 PAPSS2O95340 614 aaPredicted RBP13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CLDN7O95471 211 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 C7P10643 843 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CYP2A6P11509 494 aaPredicted RBP13.15□□□□□ -0.31
CNOT4-204ENST00000414802 ARL4CP56559 192 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CAV1Q03135 178 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CSTF1Q05048 431 aaKnown RBP13.15□□□□□ -0.31
CNOT4-204ENST00000414802 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CUL1Q13616 776 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 PTPRCAPQ14761 206 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CNGA3Q16281 694 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 LRRC66Q68CR7 880 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 USP30Q70CQ3 517 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 BMP8AQ7Z5Y6 402 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 ANKMY2Q8IV38 441 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 C1orf210Q8IVY1 113 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 MAML2Q8IZL2 1156 aaPredicted RBP13.15□□□□□ -0.31
CNOT4-204ENST00000414802 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 SCRN2Q96FV2 425 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 SAYSD1Q9NPB0 183 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CHMP2BQ9UQN3 213 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 NCKAP1Q9Y2A7 1128 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 COQ6Q9Y2Z9 468 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 PPIL1Q9Y3C6 166 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 ARL5AQ9Y689 179 aa13.15□□□□□ -0.31
CNOT4-204ENST00000414802 CACNA1HO95180 2353 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 KNL1Q8NG31 2342 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 SMAPO00193 183 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 AXIN1O15169 862 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 PLRG1O43660 514 aaKnown RBP13.14□□□□□ -0.31
CNOT4-204ENST00000414802 SLC34A2O95436 690 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 C1SP09871 688 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 MLNP12872 115 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 TDGF1P13385 188 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 ACSL1P33121 698 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 FNTBP49356 437 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 PPP2CBP62714 309 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 PPP2CAP67775 309 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 ELP6Q0PNE2 266 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 PDIA2Q13087 525 aaKnown RBP13.14□□□□□ -0.31
CNOT4-204ENST00000414802 SMAD1Q15797 465 aaKnown RBP13.14□□□□□ -0.31
CNOT4-204ENST00000414802 CASC4Q6P4E1 433 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 CES3Q6UWW8 571 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 KBTBD6Q86V97 674 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 PDIK1LQ8N165 341 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 NDUFAF2Q8N183 169 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 TTC30BQ8N4P2 665 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 CAMKK1Q8N5S9 505 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 FMO2Q99518 471 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.14□□□□□ -0.318e-7■■■□□ 19.2
CNOT4-204ENST00000414802 BFARQ9NZS9 450 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 FZD4Q9ULV1 537 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 MAD1L1Q9Y6D9 718 aa13.14□□□□□ -0.31
CNOT4-204ENST00000414802 WDFY4Q6ZS81 3184 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 IGHV1OR15-9A0A0B4J2B8 117 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 CCL22O00626 93 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 MMP20O60882 483 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 PPFIA2O75334 1257 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 PCDH8O95206 1070 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 ELFN1P0C7U0 828 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 TNFRSF8P28908 595 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 AVPR2P30518 371 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 TUBB4BP68371 445 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 TMPRSS15P98073 1019 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 ARHGEF7Q14155 803 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 CDKN3Q16667 212 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
CNOT4-204ENST00000414802 SEL1L3Q68CR1 1132 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 RFLNAQ6ZTI6 216 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 IGDCC3Q8IVU1 814 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 PPHLN1Q8NEY8 458 aaKnown RBP13.13□□□□□ -0.31
CNOT4-204ENST00000414802 MYRIPQ8NFW9 859 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 CXorf40AQ8TE69 158 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 KLK6Q92876 244 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 RAB7BQ96AH8 199 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 EID2BQ96D98 161 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
CNOT4-204ENST00000414802 SIGLEC10Q96LC7 697 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 LYSMD1Q96S90 227 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 PARD6BQ9BYG5 372 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 MAGEE1Q9HCI5 957 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 BPIFA1Q9NP55 256 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 MTRF1LQ9UGC7 380 aaKnown RBP13.13□□□□□ -0.31
CNOT4-204ENST00000414802 FNDC3AQ9Y2H6 1198 aaKnown RBP13.13□□□□□ -0.31
CNOT4-204ENST00000414802 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
CNOT4-204ENST00000414802 TDRD6O60522 2096 aaKnown RBP13.13□□□□□ -0.31
CNOT4-204ENST00000414802 USP34Q70CQ2 3546 aa13.12□□□□□ -0.31
CNOT4-204ENST00000414802 SLC7A4O43246 635 aa13.12□□□□□ -0.31
CNOT4-204ENST00000414802 LDB2O43679 373 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms