RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PROSER1Q86XN7 944 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 FAR1Q8WVX9 515 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 NELL1Q92832 810 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 C7orf26Q96N11 449 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 TCF12Q99081 682 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 SLC4A5Q9BY07 1137 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 ATP13A3Q9H7F0 1226 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 PFDN2Q9UHV9 154 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 IRF6O14896 467 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 PEX11AO75192 247 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 AVILO75366 819 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 WEE1P30291 646 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 CDC73Q6P1J9 531 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 SLC4A11Q8NBS3 891 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 TEKT5Q96M29 485 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 DNAJC28Q9NX36 388 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 TBC1D30Q9Y2I9 924 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 CCDC162PA2VCL2 907 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 PAICSP22234 425 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 CXCR2P25025 360 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 HTR7P34969 479 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 BCAP31P51572 246 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 GNA13Q14344 377 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 CYP20A1Q6UW02 462 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 LRRC20Q8TCA0 184 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 RCN3Q96D15 328 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 ZDHHC6Q9H6R6 413 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 MRPL17Q9NRX2 175 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 C3orf18Q9UK00 162 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 COQ6Q9Y2Z9 468 aa13.77□□□□□ -0.2
SMARCA4-202ENST00000413806 CLK2P49760 499 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 RAB25P57735 213 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 CDC42P60953 191 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 TUBA3CQ13748 450 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 EIF3MQ7L2H7 374 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 SLCO6A1Q86UG4 719 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 HJURPQ8NCD3 748 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 IFT172Q9UG01 1749 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 TRIM17Q9Y577 477 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 NFAT5O94916 1531 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 A0A088AWK7 358 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 SMIM35A0A1B0GVV1 85 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 FAM47E-STBD1D6RA91 191 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 ULK1O75385 1050 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 ZMPSTE24O75844 475 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 CCNE2O96020 404 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 CSH1P0DML2 217 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 CSH2P0DML3 217 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 ZNF10P21506 573 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 NTSP30990 170 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 C12orf29Q8N999 325 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 EPB41L4BQ9H329 900 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 C8orf4Q9NR00 106 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 ENTPD4Q9Y227 616 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 HGFP14210 728 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 LPOP22079 712 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 CDK18Q07002 472 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 DPYSQ14117 519 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 GALNT15Q8N3T1 639 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 CD101Q93033 1021 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 C1QTNF7Q9BXJ2 289 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 FZD1Q9UP38 647 aa13.77□□□□□ -0.21
SMARCA4-202ENST00000413806 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 SLC9A3R1O14745 358 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 LYPLA1O75608 230 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 ITGA2P17301 1181 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 ARF4P18085 180 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 CDKN2BP42772 138 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 MAP2K5Q13163 448 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 IZUMO1Q8IYV9 350 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 OR4L1Q8NH43 312 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 ELMO1Q92556 727 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 GPR20Q99678 358 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 TRAV19A0A0A6YYK7 116 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 PSMD11O00231 422 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 MSCO60682 206 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 PQBP1O60828 265 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 NADKO95544 446 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 INHBEP58166 350 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 PRKG2Q13237 762 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 PTPRNQ16849 979 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 TDRPQ86YL5 185 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 MTFMTQ96DP5 389 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 CSPG4P5Q96PW8 444 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 OMDQ99983 421 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 VPS45Q9NRW7 570 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 PAPSS1O43252 624 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 FTH1P02794 183 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 LYNP07948 512 aa13.76□□□□□ -0.21
SMARCA4-202ENST00000413806 PRKAR1AP10644 381 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms