RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-210ENST00000413578 GPBAR1Q8TDU6 330 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 SLC25A18Q9H1K4 315 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 CATSPERBQ9H7T0 1116 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 PCDHGA3Q9Y5H0 932 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 COL12A1Q99715 3063 aa12.21□□□□□ -0.46
LIMS2-210ENST00000413578 PRSS38A1L453 326 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 B4DGG1 531 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 AGRPO00253 132 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 HGSO14964 777 aaPredicted RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 FGF10O15520 208 aaPredicted RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 CREB3O43889 395 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 PPFIA2O75334 1257 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 CPNE6O95741 557 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 FUCA1P04066 466 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 KELP23276 732 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 EEF1GP26641 437 aaKnown RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 HTR7P34969 479 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 STAT1P42224 750 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 NSFP46459 744 aaKnown RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 KLK7P49862 253 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 NDST2P52849 883 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 MAPK10P53779 464 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 AIF1P55008 147 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 MAZP56270 477 aaKnown RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 CLEC16AQ2KHT3 1053 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 TCP11X2Q5H9J9 407 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 COLEC12Q5KU26 742 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 CBARPQ8N350 705 aaPredicted RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 TSEN2Q8NCE0 465 aaKnown RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 PMEPA1Q969W9 287 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 NUDT22Q9BRQ3 303 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 SELENOOQ9BVL4 669 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 DPEP2Q9H4A9 486 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 WDR26Q9H7D7 661 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 RDH14Q9HBH5 336 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 CYP4F12Q9HCS2 524 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 SPATS2LQ9NUQ6 558 aaKnown RBP12.2□□□□□ -0.46
LIMS2-210ENST00000413578 ADAM22Q9P0K1 906 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 PCDHB11Q9Y5F2 797 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 ST14Q9Y5Y6 855 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 UNC13CQ8NB66 2214 aa12.2□□□□□ -0.46
LIMS2-210ENST00000413578 IGHV5-10-1A0A0J9YXX1 117 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 STMND1H3BQB6 276 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 FGF1P05230 155 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 CALB1P05937 261 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 ELFN1P0C7U0 828 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 CCNB1P14635 433 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 SERPINA4P29622 427 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 RPL7AP62424 266 aaKnown RBP12.19□□□□□ -0.46
LIMS2-210ENST00000413578 ARHGEF7Q14155 803 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 MAP9Q49MG5 647 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 PHF19Q5T6S3 580 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 PNCKQ6P2M8 343 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 SRLQ86TD4 932 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 ARHGAP12Q8IWW6 846 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 ZSCAN1Q8NBB4 408 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 KIAA1524Q8TCG1 905 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 NKD1Q969G9 470 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 COQ10AQ96MF6 247 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 SLC39A8Q9C0K1 460 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 ADNPQ9H2P0 1102 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 CLSTN2Q9H4D0 955 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 ATP13A3Q9H7F0 1226 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 TAB2Q9NYJ8 693 aa12.19□□□□□ -0.46
LIMS2-210ENST00000413578 LRRK1Q38SD2 2015 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 PES1O00541 588 aaKnown RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 CEACAM5P06731 702 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 FGF3P11487 239 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 MYCLP1P12525 358 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 CD1CP29017 333 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 OR1D5P58170 312 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 POLR2FP61218 127 aaKnown RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 OGDHQ02218 1023 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 TLE1Q04724 770 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 NSUN2Q08J23 767 aaKnown RBP eCLIP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 SQSTM1Q13501 440 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 CFAP58Q5T655 872 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 SCYL2Q6P3W7 929 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 PIM3Q86V86 326 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 RCBTB1Q8NDN9 531 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 PTCD2Q8WV60 388 aaKnown RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 CELF6Q96J87 481 aaKnown RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 MCEEQ96PE7 176 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 CNPY3Q9BT09 278 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 TEX101Q9BY14 249 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 FRMD8Q9BZ67 464 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 CDH19Q9H159 772 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 NLRC4Q9NPP4 1024 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 FAM207AQ9NSI2 230 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 TRNAU1APQ9NX07 287 aaKnown RBP12.18□□□□□ -0.46
LIMS2-210ENST00000413578 TAAR2Q9P1P5 351 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 B4GALT6Q9UBX8 382 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 SIK3Q9Y2K2 1263 aa12.18□□□□□ -0.46
LIMS2-210ENST00000413578 NBASA2RRP1 2371 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms