RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SERPINA13PQ6UXR4 307 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 PACS1Q6VY07 963 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 GDPD4Q6W3E5 623 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 KDM7AQ6ZMT4 941 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 MICALCLQ6ZW33 695 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 TAOK1Q7L7X3 1001 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 LYSMD3Q7Z3D4 306 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 EXOC3L1Q86VI1 746 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 SRRM1Q8IYB3 904 aaKnown RBP6.67□□□□□ -1.34
VPS41-204ENST00000413141 TTC30BQ8N4P2 665 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 DEFB123Q8N688 67 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 PAF1Q8N7H5 531 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 OR13C4Q8NGS5 318 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 FAM76AQ8TAV0 307 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 STYXQ8WUJ0 223 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 PPM1EQ8WY54 764 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 PTPRN2Q92932 1015 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 LRIG1Q96JA1 1093 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 MCCC1Q96RQ3 725 aaPredicted RBP6.67□□□□□ -1.34
VPS41-204ENST00000413141 LYSMD1Q96S90 227 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 AGAP2Q99490 1192 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 RBBP8Q99708 897 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 CPNE1Q99829 537 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 P2RY13Q9BPV8 354 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 HEPHQ9BQS7 1158 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 MCMBPQ9BTE3 642 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 OSBPL1AQ9BXW6 950 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 TMEM245Q9H330 911 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 MFSD1Q9H3U5 465 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 TRABDQ9H4I3 376 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 MAGEE1Q9HCI5 957 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 TRPV5Q9NQA5 729 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 IARS2Q9NSE4 1012 aaKnown RBP6.67□□□□□ -1.34
VPS41-204ENST00000413141 NLE1Q9NVX2 485 aaPredicted RBP6.67□□□□□ -1.34
VPS41-204ENST00000413141 NSMCE4AQ9NXX6 385 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 SENP1Q9P0U3 644 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 THAP10Q9P2Z0 257 aaPredicted RBP6.67□□□□□ -1.34
VPS41-204ENST00000413141 ACTL7BQ9Y614 415 aa6.67□□□□□ -1.34
VPS41-204ENST00000413141 HMX2A2RU54 273 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 ANTXRLA6NF34 631 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 OR51F1A6NGY5 319 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 NPIPB15A6NHN6 443 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 C2orf81A6NN90 581 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 TRIM49D1C9J1S8 452 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 H7C0S8 307 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 POLR3GO15318 223 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 BUD23O43709 281 aaKnown RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 KRT37O76014 449 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 KRT38O76015 456 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 GOT2P00505 430 aaKnown RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 ASGR2P07307 311 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 HNRNPLP14866 589 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS41-204ENST00000413141 LPOP22079 712 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 LHCGRP22888 699 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 CNTFP26441 200 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 HNF1BP35680 557 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 HMGCLP35914 325 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 GALK1P51570 392 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 LIMK2P53671 638 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 CSE1LP55060 971 aaKnown RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 PPP2R2AP63151 447 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 PRAMEP78395 509 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 TMPRSS15P98073 1019 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 MPP1Q00013 466 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 THOC5Q13769 683 aaKnown RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 ENPP2Q13822 863 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 CDKN3Q16667 212 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 ARSIQ5FYB1 569 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 C9orf64Q5T6V5 341 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 GRTP1Q5TC63 336 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 EMC10Q5UCC4 262 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 ZNF470Q6ECI4 717 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 PTCRAQ6ISU1 281 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 AFTPHQ6ULP2 937 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 KIAA0408Q6ZU52 694 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 NUDT18Q6ZVK8 323 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 USP45Q70EL2 814 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 STRA8Q7Z7C7 330 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 RALGPS2Q86X27 583 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 DENND6AQ8IWF6 608 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 LMNTD2Q8IXW0 634 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 CNPY4Q8N129 248 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 SLC44A3Q8N4M1 653 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 C2CD4AQ8NCU7 369 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 OR4K2Q8NGD2 314 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 GABPB2Q8TAK5 448 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 OR8D1Q8WZ84 308 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 EZH1Q92800 747 aaPredicted RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 HDAC10Q969S8 669 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 EID2BQ96D98 161 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 MTBPQ96DY7 904 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 KLHL32Q96NJ5 620 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 SRPK1Q96SB4 655 aaKnown RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 ACOX2Q99424 681 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 C19orf43Q9BQ61 176 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 FBRSL1Q9HCM7 1045 aaKnown RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 ZDHHC4Q9NPG8 344 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 HEBP1Q9NRV9 189 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms