RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 EPN2O95208 641 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 IPO7O95373 1038 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 FGFR1OPO95684 399 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ZBED1O96006 694 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 AFPP02771 609 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 KLKB1P03952 638 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 HMBSP08397 361 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 SETSIPP0DME0 302 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TYRP14679 529 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 HNRNPLP14866 589 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 RDXP35241 583 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 PAFAH1B1P43034 410 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 NANOS3P60323 173 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 YWHAGP61981 247 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 COG7P83436 770 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ADIGQ0VDE8 80 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 BST2Q10589 180 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CUL1Q13616 776 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CNGA2Q16280 664 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CSRP2Q16527 193 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 PLK5Q496M5 336 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 USP39Q53GS9 565 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TTMPQ5BVD1 217 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CMPK2Q5EBM0 449 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 C10orf76Q5T2E6 689 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 FBXW10Q5XX13 1052 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 PM20D1Q6GTS8 502 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 LCLAT1Q6UWP7 414 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TPGS1Q6ZTW0 290 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 DGLUCYQ7Z3D6 616 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CROCCP2Q86T23 111 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 NLRP14Q86W24 1093 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 RASSF3Q86WH2 238 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ARHGEF19Q8IW93 802 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 FAM114A1Q8IWE2 563 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ZNF513Q8N8E2 541 aaPredicted RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TERB1Q8NA31 727 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 IL17RCQ8NAC3 791 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 LMO3Q8TAP4 145 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ZNF473Q8WTR7 871 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 RNF139Q8WU17 664 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TFAP2BQ92481 460 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 NDRG1Q92597 394 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 KAT5Q92993 513 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ARL8AQ96BM9 186 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ZC3H10Q96K80 434 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CNOT6LQ96LI5 555 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 OSBPL9Q96SU4 736 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 LRRC1Q9BTT6 524 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TPSD1Q9BZJ3 242 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TRIM8Q9BZR9 551 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 DCLK3Q9C098 648 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 KLHL25Q9H0H3 589 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CCDC134Q9H6E4 229 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 NHEJ1Q9H9Q4 299 aaPredicted RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 TMBIM4Q9HC24 238 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ZDHHC4Q9NPG8 344 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 OLA1Q9NTK5 396 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 DNAJC17Q9NVM6 304 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 DLL3Q9NYJ7 618 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 MARCH2Q9P0N8 246 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 SLC12A6Q9UHW9 1150 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 STRIP2Q9ULQ0 834 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 GUCA1BQ9UMX6 200 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ZFR2Q9UPR6 939 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 ZNF510Q9Y2H8 683 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 NFS1Q9Y697 457 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.44□□□□□ -1.54
LINC00342-201ENST00000412393 CAPN7Q9Y6W3 813 aa5.44□□□□□ -1.54
LINC00342-201ENST00000412393 DMXL1Q9Y485 3027 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 WDR87Q6ZQQ6 2873 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.43□□□□□ -1.54
LINC00342-201ENST00000412393 TCRBV21S2A2A0A5A6 115 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 KLHL33A6NCF5 533 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 CFAP73A6NFT4 308 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 PRRT4C9JH25 899 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 M0QYV0 167 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 ZNF806P0C7X5 589 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 KRT5P13647 590 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 LCP1P13796 627 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 HOXB2P14652 356 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 EZRP15311 586 aaKnown RBP5.43□□□□□ -1.54
LINC00342-201ENST00000412393 NTSR1P30989 418 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 CORO1AP31146 461 aaKnown RBP5.43□□□□□ -1.54
LINC00342-201ENST00000412393 CHKAP35790 457 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 MPLP40238 635 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 WASP42768 502 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 RGS7P49802 495 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 ATXN1P54253 815 aaKnown RBP5.43□□□□□ -1.54
LINC00342-201ENST00000412393 EIF3BP55884 814 aaKnown RBP5.43□□□□□ -1.54
LINC00342-201ENST00000412393 DAOAP59103 153 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 SARNPP82979 210 aaKnown RBP5.43□□□□□ -1.54
LINC00342-201ENST00000412393 GCNT1Q02742 428 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 UBXN1Q04323 297 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 SF3A2Q15428 464 aaKnown RBP5.43□□□□□ -1.54
LINC00342-201ENST00000412393 STILQ15468 1287 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 SPA17Q15506 151 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 SNCBQ16143 134 aa5.43□□□□□ -1.54
LINC00342-201ENST00000412393 CCDC6Q16204 474 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms